Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1138 ATGGAGAACGCCGTGGGATCCGGATCTGCCACCAACGGGGAGGTGGCTCCGCCGCGGAAGGTTGCATTGATAACCGGAATCACGGGACAGGACGGTTCCTACCTCACGGAATTCCTGCTCAACAAGGGATACGAGGTGCACGGCCTGATCCGTCGCTCCTCCAACTTCAACACGCAGCGCATCGACCACATATACGTCGATCCCCACAACGCCCACAAGGCGCGCATGAAGCTCCACTACGCCGATCTCACCGACGCCTCCTCGCTCCGCCGCTGGCTCGACACTATTCTTCCCGACGAGGTCTACAACCTCGCCGCCCAGTCTCACGTCGCCGTCTCCTTCGAGATCCCCGACTACACCGCCGACGTCGTCGCCACCGGCGCCCTGCGCCTCCTCGAGGCCGTCCGCTCCCACATCGCTGACTCCGGCCGCTCCCACATCCGCTACTACCAGGCCGGCTCCTCCGAGATGTTCGGGTCCACCCCGCCGCCGCAGTCCGAAACCACCCCCTTCCACCCCCGCTCCCCCTACGCCGCCTCCAAATGCGCTGCGCACTGGTACACCGTCAACTACCGTGAGGCCTACGGACTCTACGCCTGCAATGGCATTCTTTTCAACCACGAGTCCCCTCGCCGCGGCGAGAATTTCGTGACGCGCAAGATCACGCGTGCCGTTGGCCGGATCAAGATCGGGCTCCAGAGCAAACTCTTTTTGGGGAACCTTCAGGCCTCCAGGGATTGGGGCTTCGCTGGGGACTATGTTGAGGCCATGTGGCTGATGCTGCAGCAAGAGAAGCCCGATGACTATGTTGTGGCCACCGAAGAGTCCCACACCGTTGAGGAGTTCTTGGAAGTGGCCTTCGGCTATGTGGGACTCAATTGGAGAGATCATGTGGTGATTGACAAGAGGTACTTTCGTCCTGCTGAGGTTGACAACCTCAAAGGGGACGCCTCTAAGGCCAAGAAGGTGCTTGGTTGGAAACCTAAAGTGGGGTTTGCGCAGCTCGTTAAGATGATGGTTGACCAGGACGTTGAGATGGCCAAGAAGGAGAAGGTTCTTGTTGATGCTGGTTACATTGATGCTCAGCAACAGCCTTGA 1098 0.5974 MENAVGSGSATNGEVAPPRKVALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFNTQRIDHIYVDPHNAHKARMKLHYADLTDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIADSGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLYACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVVIDKRYFRPAEVDNLKGDASKAKKVLGWKPKVGFAQLVKMMVDQDVEMAKKEKVLVDAGYIDAQQQP* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1138 365 Gene3D - 23 329 - -
Pvu2g1138 365 Hamap GDP-mannose 4,6-dehydratase [gmd]. 20 349 IPR006368 GO:0008446|GO:0019673
Pvu2g1138 365 CDD GDP_MD_SDR_e 21 345 - -
Pvu2g1138 365 Gene3D - 213 339 - -
Pvu2g1138 365 Pfam GDP-mannose 4,6 dehydratase 23 339 IPR016040 -
Pvu2g1138 365 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 12 360 - -
Pvu2g1138 365 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 345 IPR036291 -
Pvu2g1138 365 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 12 360 IPR006368 GO:0008446|GO:0019673
Pvu2g1138 365 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 20 346 IPR006368 GO:0008446|GO:0019673
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1138 23 205 Miscellaneous Gene Families AT4G12250 29.534 4.15e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1138 K01711 - gmx:100777692 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1138 2 22446725 22448152 Pvu2g1138 2 22446725 22448152 ECH