Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1106 ATGGCTTCTCAAAACCCTAAGCAAAGAAATTCCCTTTATCCTCAAGTAAACGACTCTAATCCCGATGCTCCCTCGCCTCTCCTCGATGTCAATCGCTCATCCTCTTCGCAAGCCACACTCTACCCCTCCATTGATTACAACGACCTCGTTCAGAACCTCTTTTCCGAGGATGCGTCAGCTGCTGACTCCCCCTCCGCGCCGCCTGAGGCCATCGAGGAGATCCTCCTCCGCATCCCCGGAGCGATCCTCAACCTCGTCGACAAGGACTACAGCGTCGAGCTTGCGTGCGGTGACTTTTCCGTCATCCGCCTCCGGCAGGGAGACAACGCAGTCGCCGTGTACGCGCGCGTCGCGGACGAGATTCAATGGCCGCTGGCGAAGGACGAGACCGCCGTGAAAGTCGACGATTCGCACTATTTCTTCTCGTTCCGCGTCCCCAAGGGCTCCGATCCTGGGGAGGAGGAAGAGGATGTGCTCAGCTACGGGTTAACGATCGCGTCGAAGGGGCAGGAGAGGCTTCTGAAGGAGCTTGACTCGGTTTTGGAGAGCTGCAGCTGCTTCTCCGTGCAGAGGGTTTCGGAGAAGGCGAAGAAGAAAGGGGAGGCTCTGGATGGGAGCGTGGCGAAGGAGGTTTCGCCGAAGGATTTGAAATCGGGGAAGAAGAAGGAGATGATGGAGGAGCGGTGCGCTGCGTATTGGACTACTTTGGCGCCCAATGTGGAGGATTATAGTGGAACTTCTGCGAGGATGATCGCTGCAGGGTCTGGACATGTGGTTAAAGGGATTTTGTGGTGTGGGGAAGTGACAGTGGATAGGTTGAAATGGGGGAATGAGGTTATGAAAAAGAGAATCACTCCTGGTTCGAATGCTGAGGTTAGTCCTCAGACCTTGAAGCGGATTAAGAGGGTTAAGAGAGTTACTAAAATGACAGAGAAAGTAGCAAATGGTTTCCTCTCTGGGGTCGTGAAAGTGTCTGGATTTTTCACCGGTTCAGTGGTAAACTCAAAAGCTGGAAAGAAATTTTTCAGCTTTCTACCTGGGGAAGTTATACTTGCATCGTTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTGACTGGAAAGAATGTGTTGTCAACATCATCGACTGTGACCACCGAGCTTGTTGATCACAGGTATGGAGAAAAAGCAGCTGAAGCGACGAGTGAAGGCTTTACTGCCGCTGGTCATGCTTTGGGTACTGCGTGGGCTGCTTTTAAGATTAGGAAGGCTATCAACCCTAAGAGTGTTCTTAAACCTACAACCCTAGCCAAAGCTGGTGCCAAAGCTGCAGCTTCTGAATTTAAGGGAATAGGCAGGGGAATATCAACGCGTGATGGTAGTTGTTGA 1371 0.5186 MASQNPKQRNSLYPQVNDSNPDAPSPLLDVNRSSSSQATLYPSIDYNDLVQNLFSEDASAADSPSAPPEAIEEILLRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVADEIQWPLAKDETAVKVDDSHYFFSFRVPKGSDPGEEEEDVLSYGLTIASKGQERLLKELDSVLESCSCFSVQRVSEKAKKKGEALDGSVAKEVSPKDLKSGKKKEMMEERCAAYWTTLAPNVEDYSGTSARMIAAGSGHVVKGILWCGEVTVDRLKWGNEVMKKRITPGSNAEVSPQTLKRIKRVKRVTKMTEKVANGFLSGVVKVSGFFTGSVVNSKAGKKFFSFLPGEVILASLDGFSKVCDAVEVTGKNVLSTSSTVTTELVDHRYGEKAAEATSEGFTAAGHALGTAWAAFKIRKAINPKSVLKPTTLAKAGAKAAASEFKGIGRGISTRDGSC* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1106 456 Pfam Senescence domain 250 435 IPR009686 -
Pvu2g1106 456 PANTHER SPARTIN 154 443 IPR045036 -
Pvu2g1106 456 PANTHER SPARTIN 1 149 IPR045036 -
Pvu2g1106 456 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 154 443 - -
Pvu2g1106 456 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 149 - -
Pvu2g1106 456 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1106 Pvu-Chr2 21648406 21653968 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1106 K19366 - gmx:100804971 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1106 2 21648406 21653968 Pvu2g1106 2 21648406 21653968 ECH
Pvu2g1106 2 21648406 21653968 Pvu3g2722 3 49165478 49168089 PCT