Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1101 ATGGCTTCCGCAGCCACCAATTTCTCTCTTTCTCTCTGCACCAAACATCAAACACCAATCCTCAAACCCTCCTTCTTCTTCTATCCCACCATCACCAACAACAACAACCATTTCTTCAAATCTAACAAGTGTCCTTCACTCTCTGCTTCCACAGCTCGCAACTCAAGGATATGCGCCACCTCTTCTCGACTCATGGATCCCTCCGCTGCGAAATCCGAACCCAACCTTCCCACCACCACCGTTCAAGTCGATTTGGGTGATCGGAGCTATCCCATTTACATCGGATCCGGTTTACTAGACCAACCCGACTATCTTCAGAGGCATGTGCATGGAAAGAGGGTCCTAGTTGTAACTAACAAAACGGTCGCACCACTTTATCTAGACAAGGTTGTTGATGCTTTGACAAGGGGAAACCCAAATGTTTCTGTGGAGAGTGTAATTTTACCTGATGGTGAACAGTACAAGGACATGGATACCCTTATGAAAGTCTTTGACAAGGCCATTGAGTCACGACTCGACCGGCGGTGTACCTTTGTTGCCCTTGGTGGTGGTGTTATTGGCGATATGTGTGGCTTTGCTGCCTCTGCTTTTCTACGTGGTGTTAATTTTATTCAGATTCCTACCACAGTGATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGGATAAATCATCACCTTGGAAAGAATCTGATCGGTGCCTTTTACCAACCTCAGTGTGTGCTTATAGACACGGACACATTGAATACATTACCAGATAGGGAACTGGCATCAGGGATTGCTGAGGTCATAAAGTATGGCCTCATTAGGGATGCAGAGTTTTTTGTGTGGCAAGAGAAAAATATGCAGGCATTACTGGCTAGAGATCCTAGTGCATTGGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCCTTAGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCTATAGAAAATGGGGTTGGCTATGGGAAGTGGCTTCATGGAGAGGCTGTTGCAGCTGGCACGGTAATGGCTGTTGACATGTCATATCGCCTAGGTTGGATTGATGAATCTCTTGTGAAGCGAGTTGGAGACATTTTAAAACACGCTAAGTTACCCACAGCCCCTCCTGAGATAATGACTGTGGACATGTTTAAATCTGTCATGGCGGTTGATAAGAAGGTAGCAGATGGATTGCTCAGGCTTATTCTTCTAAAGGGTCCTCTGGGAAATTGTGTATTCACGGGGGATTATGACAAAAAGGCCATGGATGAAACGCTTCGTGCATTCTGTAAATCCTGA 1329 0.4567 MASAATNFSLSLCTKHQTPILKPSFFFYPTITNNNNHFFKSNKCPSLSASTARNSRICATSSRLMDPSAAKSEPNLPTTTVQVDLGDRSYPIYIGSGLLDQPDYLQRHVHGKRVLVVTNKTVAPLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHHLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGIAEVIKYGLIRDAEFFVWQEKNMQALLARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIENGVGYGKWLHGEAVAAGTVMAVDMSYRLGWIDESLVKRVGDILKHAKLPTAPPEIMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDKKAMDETLRAFCKS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1101 442 Hamap 3-dehydroquinate synthase [aroB]. 78 440 IPR016037 GO:0003856|GO:0005737|GO:0009073
Pvu2g1101 442 Pfam 3-dehydroquinate synthase 146 404 IPR030960 -
Pvu2g1101 442 SUPERFAMILY Dehydroquinate synthase-like 80 432 - -
Pvu2g1101 442 Gene3D - 252 442 - -
Pvu2g1101 442 PANTHER 3-DEHYDROQUINATE SYNTHASE 78 438 - -
Pvu2g1101 442 TIGRFAM aroB: 3-dehydroquinate synthase 90 434 IPR016037 GO:0003856|GO:0005737|GO:0009073
Pvu2g1101 442 Gene3D - 66 251 - -
Pvu2g1101 442 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 78 438 - -
Pvu2g1101 442 CDD DHQS 89 436 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1101 K01735 - gmx:100806628 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1101 2 21516894 21520358 Pvu2g1101 2 21516894 21520358 ECH