Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1027 ATGGCTCAAACTCAACCATCTTCACGTCACTCCCTTCTGCTTCTCTTAGCATGCACCCTCTTCCCACAACTTTACGCTTCCTACACCACCAAAATCGGCGTCAACTATGGCACGGTGGCAGACAACCTCCCACCGCCCTCCACTGTGGCCGCCTTCATCAAATCTCAAACAACCATCGACCGCGTTAAACTCTTCGACGCCAACCCCGACATGCTCCGCGCCTTCGCCGGCACCGGAATCTCCATAACCGTCACTGTGCCGAACGCCGCCATCCCCTCCCTCTCGACGCTCCCTGCCGCGCAAGCGTGGCTCTCCGAAAACATCCTCCCCTTCCTCCCGCAAACCGCCGTGACGCGTATTGCGGTCGGGAACGAGGTTCTCGCCACCTCCGACAAAACCCTAATCGCGCACATTCTTCCAACTATGAAATCCCTCCACGACGCCCTCTCCCTCGCCAACCTCACCGCCGTTCAAGTCTCAACCCCTCACTCACTCGGGATCCTGGCTTCTTCAGAGCCTCCTAGCGCCGCCTCGTTCCGCCGCGGCTACGACAAAGCCATTTTTGCACCGATTCTGGAGTTCCACCGGCGAACAAAGTCCCCCTTCATGGTCAACCCGTATCCGTTCTTCGGCTTCGACCCGAGCCGAGCCGAGAGCCTGAACTACGCGCTCTTCAAACCAAACGGCGGCGTTTGGGATGCGGCGACGTCAGTGAACTATACGAACATGTTCGACGCGCAAATGGACGCGATTTTCTGGGCGATGAAGAAACTTGGGTATGAGGACGTGGAACTGGTGGTGGCCGAAACGGGTTGGCCCTCTGTTGGTGAGACGAACGAAGCGGGTGCGAGTTTTGACAATGCGGCGTCGTATAACGGGAATCTTATGAAGCACGTTAACTCTGGTAAAGGGACCCCTCTCATGCCTAATAGGACTTTCGAGACTTTCATCTTCTCCCTCTTCAATGAGAATCTCAAGCCCACAGTTTCTGAGCGTAATTATGGCTTGTTTAATCCCGATCTTACCCCTGTTTACCACCTCGACGACTTCATTGCCAGAGAGGCAGCAGGTCCAGCATCTGGACCCACTGCATTAACACCATCAGAGTCACCTCTTTCTTCGTCGTCTTCAAAGAAGAAATGGTGCGTACCAAGAAGGGATGCGAGTGAAGCAGCGTTGCAGGCAAACATTGACTTTGTTTGTAGCAGCAGTGGAATAGAGTGTGGGCCCATTAAGGACGTTGGGCCATGCTTTAAGCCCAATACAATTAGGTCCCACGCGGCATATGCCATGAACGCATATTACCAAGCATCTGGTGGTCACGATTTCGATTGCGATTTCGGCCACACCGGACTCATCACTTACACCGACCCTAGTTCCCAGACATGTACGTATCCAGATGCCGCCACCGCTACAGGGCTGACAGCCAGAAAGCCCGACAGAGCTGCCTCACTAACACCTGCCTTTCACAACAATCACTTATTTATTTGTGTTCAAATTATAATTTGTTTCACTTTTTTCTAA 1524 0.5354 MAQTQPSSRHSLLLLLACTLFPQLYASYTTKIGVNYGTVADNLPPPSTVAAFIKSQTTIDRVKLFDANPDMLRAFAGTGISITVTVPNAAIPSLSTLPAAQAWLSENILPFLPQTAVTRIAVGNEVLATSDKTLIAHILPTMKSLHDALSLANLTAVQVSTPHSLGILASSEPPSAASFRRGYDKAIFAPILEFHRRTKSPFMVNPYPFFGFDPSRAESLNYALFKPNGGVWDAATSVNYTNMFDAQMDAIFWAMKKLGYEDVELVVAETGWPSVGETNEAGASFDNAASYNGNLMKHVNSGKGTPLMPNRTFETFIFSLFNENLKPTVSERNYGLFNPDLTPVYHLDDFIAREAAGPASGPTALTPSESPLSSSSSKKKWCVPRRDASEAALQANIDFVCSSSGIECGPIKDVGPCFKPNTIRSHAAYAMNAYYQASGGHDFDCDFGHTGLITYTDPSSQTCTYPDAATATGLTARKPDRAASLTPAFHNNHLFICVQIIICFTFF* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1027 507 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 471 IPR044965 GO:0004553|GO:0005975
Pvu2g1027 507 Pfam X8 domain 380 451 IPR012946 -
Pvu2g1027 507 Gene3D Glycosidases 30 353 - -
Pvu2g1027 507 MobiDBLite consensus disorder prediction 363 379 - -
Pvu2g1027 507 SMART X8_cls 380 465 IPR012946 -
Pvu2g1027 507 Pfam Glycosyl hydrolases family 17 32 348 IPR000490 GO:0004553|GO:0005975
Pvu2g1027 507 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Pvu2g1027 507 Gene3D - 374 474 - -
Pvu2g1027 507 SUPERFAMILY (Trans)glycosidases 32 348 IPR017853 -
Pvu2g1027 507 MobiDBLite consensus disorder prediction 358 379 - -
Pvu2g1027 507 PANTHER GLUCOSIDASE-LIKE PROTEIN 13 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1027 Pvu-Chr2 19502724 19505270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1027 10 345 Miscellaneous Gene Families AT3G46570 64.012 1.93e-150 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g1027 - - vun:114175263 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1027 2 19502724 19505270 Pvu2g1027 2 19502724 19505270 ECH