Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0924 ATGCCTTTAGTTCCAAATATGGCGCAAGAACAGGAGTTCAGAACAAGCAACTCACTTTCAAAATGTGAGACCTATTTCGAAATCATACAATCTAGAAAGAAGCTACCACAGTCATTGCAGGAGACCTTGACAGATGCCTTTGCAAAGATTCCAGTCTCTTCTTTTCCAGAAGTTCCTAGCGGAAAAGTGATTGAAATTCTAGCAGATACGCCTGTAGGAGAAGCAGTTAAGATTCTATCTGAAAGCAACATTTTAGCAGCACCAGTTAAAGACCCAGACGCTGTTACTAGTTCAGATTGGAGAAGCAAGTACCTTGGCATCATAGATTACTCAGCCATCATTCTCTGGGTGCTGGAGAGCGCAGAACTTGCAGCAGCTGCTATATCAACAGGTACAGCAACAGCTGCTGGAGTTGGTGCAGGAACCGTGGGTGCTTTGGGAGCACTAGCATTGGGAATGACAGGTCCTGCTGCAATCGCTGGACTAACCGCCGCTGCAGCAGGTGCTGCACTGGTAGGTGGCATTGCTGCAGATAATGTGATGGCTAACGATGCACCTCAAGCTGCCGATGACCTGGGAGAAGATTTTTACAAAGTAATACTGGAAGAAGAACCCTTCAAGTCAACAACGGTAAAATCAATACTTACATCATATCGATGGGCACCTTTTGTTCCAGTTGGAAAAGAGAGCGCTATGTTGACTGTCTTGTTGCTTCTCTCAAAGTATAGGCTGAGGAATGTACCTGTGATAGAACCAGGTAAACCTGACATGGTAAACTTCATTACTCAGTCTGCAGTTGTCAAAGGTCTTGAGAGATGCAAAGGCAGAGATTGGTTTGACTGCATTGCAGAAAAGTGTATATCTGATCTGGGACTTCCATTTATGTCTACAGCTGAGGTTATTAGCATCCAGAGCAATGAGTTGATTCTTGAAGCTTTCAAGAAAATGAGGGATAATAAAATCGGTGGTCTTCCTGTAGTAGAGGGGCCAAGGAAGAGCATTGTTGGAAACGTGAGCATACGAGACATCAGATACTTGCTGCTAAGGCCTGAGATGTTCACAAATTTTAGGAAGCTGACTGTGATGGATTTCATGAACAAAATTGTCTCTTCGTCCCTGCAAACTGGAAACGGTAGCCACCAGCCTATAACATGCAAGCCTGACGCGACAATGCAGAGTGTGATCCATACTCTTACTTCTCAGTCTATTCACAGGATTCATGTGGTAGATGGACAGAATGAAGTAGTTGGAGTCATTACACTGAGAGATGTTATCTCTTGTTTTGTCACCGAACCTCCTTACCATTTTGATGATTACTATGGATTTGCAGTAAAGGAGATGTTGAGTCAGTGA 1353 0.439 MPLVPNMAQEQEFRTSNSLSKCETYFEIIQSRKKLPQSLQETLTDAFAKIPVSSFPEVPSGKVIEILADTPVGEAVKILSESNILAAPVKDPDAVTSSDWRSKYLGIIDYSAIILWVLESAELAAAAISTGTATAAGVGAGTVGALGALALGMTGPAAIAGLTAAAAGAALVGGIAADNVMANDAPQAADDLGEDFYKVILEEEPFKSTTVKSILTSYRWAPFVPVGKESAMLTVLLLLSKYRLRNVPVIEPGKPDMVNFITQSAVVKGLERCKGRDWFDCIAEKCISDLGLPFMSTAEVISIQSNELILEAFKKMRDNKIGGLPVVEGPRKSIVGNVSIRDIRYLLLRPEMFTNFRKLTVMDFMNKIVSSSLQTGNGSHQPITCKPDATMQSVIHTLTSQSIHRIHVVDGQNEVVGVITLRDVISCFVTEPPYHFDDYYGFAVKEMLSQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0924 450 ProSiteProfiles CBS domain profile. 378 438 IPR000644 -
Pvu2g0924 450 CDD CBS_pair_SF 62 114 - -
Pvu2g0924 450 SUPERFAMILY CBS-domain pair 261 437 IPR046342 -
Pvu2g0924 450 ProSiteProfiles CBS domain profile. 295 354 IPR000644 -
Pvu2g0924 450 PANTHER BNAANNG38820D PROTEIN 14 449 - -
Pvu2g0924 450 ProSiteProfiles CBS domain profile. 58 123 IPR000644 -
Pvu2g0924 450 Pfam CBS domain 295 347 IPR000644 -
Pvu2g0924 450 Pfam CBS domain 379 426 IPR000644 -
Pvu2g0924 450 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 14 449 - -
Pvu2g0924 450 SMART cbs_1 299 348 IPR000644 -
Pvu2g0924 450 SMART cbs_1 381 429 IPR000644 -
Pvu2g0924 450 SMART cbs_1 62 118 IPR000644 -
Pvu2g0924 450 SMART cbs_1 222 271 IPR000644 -
Pvu2g0924 450 Gene3D - 54 274 IPR046342 -
Pvu2g0924 450 Gene3D - 282 431 IPR046342 -
Pvu2g0924 450 SUPERFAMILY CBS-domain pair 43 270 IPR046342 -
Pvu2g0924 450 CDD CBS_pair_SF 297 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0924 Pvu-Chr2 14891307 14893841 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0924 - - gmx:100800376 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0924 2 14891307 14893841 Pvu2g0924 2 14891307 14893841 ECH