Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0913 ATGAGTTCTGGTGGGTACGCTGTAGAGGTTACGGGTCTCTCTCCAAAAGTCACTGAGAAGGATGTCCGTGACTTCTTTGCTTTCTCTGGTGTCATTGAGACCGTTGAAATTATAAGGTCTGGTGATTATGCTTGTACTGCGTATGTGACTTTCAAAGATGCATATTCACAAGAAACTGCATGCTTGCTCAGTGGAGCCACAATTTTAGATCAACGCGTATGCATAACACGATGGGGGCAATATGAAAATGAGTTTGATTTTTGGAACGGGCCCTCTAGTAGTTACGGGGACGAGGCTGCCTCAACTACACAGAACAGTCAATTTGTTTCCTCTGCTGGAGAAGCAGTCACCATGGCCCAAGAAGTCGTAAAGACCATGGTAGCAAAGGGATATGTTCTCAGCAAGGATGCCCTAGCTAAGGCTAAAGAATTTGACGAGTCTCATCTGGTTTCTGCCACTGCAACAGCAAAGGTTTCTGAACTCAGCCAGAGAATTGGCCTCACAGATAAGATATCTGCTGGTATTGGAGCTGTTAAATCTGTAGATCAGAGATATAATGTCTCTGAAACAACCATTGCGGCAGCATCCACAGCGGGAAGATCGGTAGCTGCGGCTGCAAACTCTTTTGTAAACAGCAGCTATTTTTCAAAAGGAGCCTTGTGGGTGTCAGGTGCTCTAACCAGAGCAGCTCAAGTTGCTTCTGATTTGGGTACTCGCAGGGATGGACAGTAA 732 0.459 MSSGGYAVEVTGLSPKVTEKDVRDFFAFSGVIETVEIIRSGDYACTAYVTFKDAYSQETACLLSGATILDQRVCITRWGQYENEFDFWNGPSSSYGDEAASTTQNSQFVSSAGEAVTMAQEVVKTMVAKGYVLSKDALAKAKEFDESHLVSATATAKVSELSQRIGLTDKISAGIGAVKSVDQRYNVSETTIAAASTAGRSVAAAANSFVNSSYFSKGALWVSGALTRAAQVASDLGTRRDGQ* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0913 243 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 241 - -
Pvu2g0913 243 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Pvu2g0913 243 SUPERFAMILY RNA-binding domain, RBD 7 82 IPR035979 GO:0003676
Pvu2g0913 243 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 71 IPR000504 GO:0003723
Pvu2g0913 243 Gene3D - 2 84 IPR012677 -
Pvu2g0913 243 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 1 241 - -
Pvu2g0913 243 CDD RRM_Vip1_like 8 76 IPR034360 -
Pvu2g0913 243 SMART rrm1_1 7 77 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0913 Pvu-Chr2 14436533 14441267 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0913 - - gsj:114378905 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0913 2 14436533 14441267 Pvu2g0913 2 14436533 14441267 ECH