Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0887 ATGGCAAAACCAAGTTCAGGTGATGGCAGGACTAGAAGCTCCGTGCAGATCTTTATAGTAGTTGGTCTGTGCTGTTTCTTCTATATGCTGGGTGCATGGCAGAGAAGTGGTTTTGGAAAGGGAGATAGCATAGCATTGGAGATTACTAAGAAAGGCTCAGACTGTAATATACGCCCTGATTTGAGTTTTGACTCTCACCATGGTGGAGAAGTCAGCAGAATTGATGAGTTTGAGTCAAAACCAAAGGTGTTTGAACCTTGCAGTGCTCATTTCATCGATTATACCCCTTGCCAAGATCAACGGCGTGCCATGACTTTTCCAAGAGAAAATATGAATTATCGTGAGAGGCATTGTCCCCCTGAGGAAGAAAAGTTGCACTGTTTGATCCCAGCACCTAAGGGATATGTTACTCCATTTTCATGGCCAAAAAGCCGTGATTATGTTCCATACGCAAATGCACCTTACAAGAGTCTTACAGTTGAGAAGGCCATTCAGAACTGGATCCAGTATGAGGGAAATGTTTTCAGATTTCCTGGTGGTGGAACTCAGTTTCCGCAAGGTGCAGACAAATATATTGATCAGCTTGCTTCTGTGATACCTATAAAGGATGGAACAGTCAGGACAGCACTGGACACTGGTTGTGGGGTTGCCAGTTGGGGTGCATATCTCTGGAGCCGAAATGTTATTGCCATGTCATTTGCACCAAGGGACTCTCATGAAGCCCAAGTACAGTTTGCTCTTGAAAGAGGTGTACCTGCTGTCATTGGTGTTCTTGGAACCATAAAATTGCCTTATCCATCTGCAGCTTTTGACATGGCACATTGCTCTCGCTGCTTGATTCCCTGGGGAGCAAATGATGGAATGTATATGATGGAAGTTGACCGAGTTCTAAGACCTGGTGGTTATTGGGTGTTGTCGGGTCCTCCAATCAATTGGAAGGTTAACTACAAATCCTGGCAGAGAACTTTGGAGGATCTTGAAGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGCTCCTTTGCTGGGAGAAGAAGTCTGAAAAATCTGAAATTGCCATTTGGCAAAAAACTGTAGACTCCGAATCATGTCGCAGCAGACAAGAAGATTCTAGTGTTAAATTCTGTGAGTCGACAGATGCTAATGATGTCTGGTATAAGAAAATGGAGGTCTGCATTACTCCAACTCCTAAAGTTTCTGCTCATCTTAAGCCATTTCCAGAAAGGCTTTATGCCATCCCCTCTAGAATTGCTGGTGGCTCTGTGCCTGGAGTTTCGGTTGAGGCATACGAAGATGATAACAAAAAGTGGAAAAAGCATGTAAATGCTTATAAGAAAATTAATCCACTCCTGGATTCTGGAAGGTATCGCAACATTATGGATATGAATGCTGGATTGGGTAGTTTTGCTGCAGCTATTGAATCAGCCAAGTTATGGGTCATGAATGTTGTGCCTACTATAGCTGAGAAAAGTACACTGGGTGTCATATATGAGCGAGGACTTACTGGCATCTATCATGATTGGTGTGAAGCGTTTTCTACATACCCGAGGACATATGACCTCATTCATAGCCATGGTCTCTTTAGTCTATACAAGGATAAATGCAATGAAGAAGACATTCTTCTTGAGATGGACCGGATTTTACGCCCAGAAGGTGCTGTAATATTCCGTGATGAAGTTGATGCCTTGATTAAGGTAAAGAAATTAATCGAAGGAATGAGATGGGATACTAAAATGGTGGACCATGAGGATGGTCCCCTTGTTCCTGAGAAGATACTAATTGCTGTGAAGCAGTATTGGGTTGCGAATGCCACATCTACACAGTAA 1824 0.4298 MAKPSSGDGRTRSSVQIFIVVGLCCFFYMLGAWQRSGFGKGDSIALEITKKGSDCNIRPDLSFDSHHGGEVSRIDEFESKPKVFEPCSAHFIDYTPCQDQRRAMTFPRENMNYRERHCPPEEEKLHCLIPAPKGYVTPFSWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPIKDGTVRTALDTGCGVASWGAYLWSRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKLPYPSAAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKSWQRTLEDLEEEQRKIEEVAKLLCWEKKSEKSEIAIWQKTVDSESCRSRQEDSSVKFCESTDANDVWYKKMEVCITPTPKVSAHLKPFPERLYAIPSRIAGGSVPGVSVEAYEDDNKKWKKHVNAYKKINPLLDSGRYRNIMDMNAGLGSFAAAIESAKLWVMNVVPTIAEKSTLGVIYERGLTGIYHDWCEAFSTYPRTYDLIHSHGLFSLYKDKCNEEDILLEMDRILRPEGAVIFRDEVDALIKVKKLIEGMRWDTKMVDHEDGPLVPEKILIAVKQYWVANATSTQ* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0887 607 Coils Coil 316 343 - -
Pvu2g0887 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 603 IPR004159 GO:0008168
Pvu2g0887 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 596 IPR004159 GO:0008168
Pvu2g0887 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 442 558 IPR029063 -
Pvu2g0887 607 PANTHER METHYLTRANSFERASE PMT2-RELATED 5 603 - -
Pvu2g0887 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 326 IPR029063 -
Pvu2g0887 607 Gene3D Vaccinia Virus protein VP39 161 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0887 Pvu-Chr2 13392031 13396875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0887 - - gmx:100778611 1180.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0887 2 13392031 13396875 Pvu2g0887 2 13392031 13396875 ECH