Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0826 ATGGATCAGTCACCATTCATCACTCCGAGAGGATCTTTGTCATCCAGCATTGGAGACGCTTCAGAGCTTGAGGGAAATCTCACACTCAGTGATAAGCTCAAGGTTTTCAAAAGCTCCTCCTTTGATCCCAATAACTATGTTGCCTCCAAATCCCGCAGCATGAACGAAAAGGAGATAAAACACTTGTGCGCCTATCTTATTGACCTGAAGAAGGCTTCAGCAGAAGAAATGCGTAAAAGTGTTCTTGCTAACTACTCAGCTTTCATACGTACGTCCAAAGAGATATCTGATCTTGAGGGAGAGTTGCTTTCCATGAGAAATCTTCTATCCACCCAGGCTGCTTTGGTTCATGGTTTAGCCGATGGGTGCGAGCTTACTCCCATGATTAGTGGCAATGAAGATTTAGAATTGGATGACATACTAGATGAAAAAACAGAAATATCCAAGACAGAAAAATGGCTAATAGGATATTTAGAAACCCTTGAGGTCCTATTAGCGGAGAAAAGAGTGGATGAATCTATGGCTGCTTTGGACGAAGGAGAAAATATGGTAAAAGAAATTAGTGAAGGGAGAACTTTTTTAAGTCCAACTTTATTTGAAGCATTGCAAGATGCTATTGCTGAACAGAGACAAAAACTAGCAGATCAACTAGCAGAAACTATCTGCCAGCCATCAACTCGCAGTGTAGAGATTCGATCAACAGCGTTGTCATTGAAAAAACTTGGGGATGGTCCTCGTGCTCATACGTTACTACTAAGTTCTCGACAAGGAACATTACTACGTAGCATGAAAAGTCTTCAATCCAGCAATTATGGGGTTGGGTCATTTACTACTACCATTTCACAGCTTGTTTTTTCCACCATTTCACAAGCAGCATCAGATTCTTTGTCAGTGTTTGCTGAAGAAGAACCCGCATATACCTCTGAGCTAGTAACTTGGGCAGTTGGAGAGGCTGAGAAATTTGCTGCTCTGCTTAAGAAATGTATTCTTGCTTCTACAGCTGCCGCAGGAGGTTTGAGAGTAGCATCTGAATGTGTTCATGTTTGCATGAGTCACTGCTATCTGCTAGAGGCTACTGGGCTAGCCCTTTCCCCTGTCCTAATAAAATATTTTAGGCCGTTTGTTGAGCAAGCACTGAAAACAGATTTGAAAAGAATTGAACAAAGTAGTTCTGCACTGGCTTCTGCAGAGGATTGGGTACTTGCTTATGCACCAACCAGCAGCAGGTCTTCTGGCCAACCTCCATCTTCTCACAGTAACTTAGGTTTGCTCCAACCAAAGCTTTCAAGCAGTGCTCACAAATTCAACTCAATGGTTCTGGAACTATTTGAAGATGTAGGGCCTCTTGAAATACTGCAATTGGATGTTCTTGCAGTTGAAGGCCTTATACAAGAGTTCAACTTCTATGTCAACTTGCTAATAAATGCATTGCCAGGATCAGTGGTAACTGAGAACCTAGAAGGGCACAGAATTGTTAAGCTTGCTGAGACTGAAGCACAGCAGATAGCATTGTTGGCGAATGCAATATTACTGGCAGATGAGCTGCTTCCACGTGCTGTTTTCAAGCTTTCACATAGCACCAAAGGTGATGAGTCTCAGAGAAAAGGATCAGAAAAACAGCGTGAACTAAAGAAAAGGCTCCAACGTGAAGTTGATCACCTGCGTGACAGCTTTTGCCGGCAACATGCTCTTGAACTTATCTTCACAGAAGAAGGAGAAGCTCGTCTAAACGCATTAATATATTTGGGAATGGATGGTAACGTAGAGCAGCCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGATTTTTGCTAAGCTTACCGAAGTGGCAAGCATTGCAGCAGACGTGTTTGTAGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTTGCAGAAACAGTGGTCCTGTGGCTTTCTGATGACCAAGCCTTCTGGGAAGAGGTTGAGACAGGATCAACACCTTTGGGTCCCATAGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAACATTATTGAAAGGGCTATTAATGCTCTTGCTGCTACAGGTCTAGATCCCAACAGTGTCTTGCCTGAGGATGAATGGTTTGTTGAAGTTAGTGAAATTTCTATAAAGATGTTAACCGGCAGAGCTGCCTTTGATAGTGTAGAGGAAGATATTCCTAGCCCCACTTCATTTGTCCAAACATAG 2253 0.4239 MDQSPFITPRGSLSSSIGDASELEGNLTLSDKLKVFKSSSFDPNNYVASKSRSMNEKEIKHLCAYLIDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLADGCELTPMISGNEDLELDDILDEKTEISKTEKWLIGYLETLEVLLAEKRVDESMAALDEGENMVKEISEGRTFLSPTLFEALQDAIAEQRQKLADQLAETICQPSTRSVEIRSTALSLKKLGDGPRAHTLLLSSRQGTLLRSMKSLQSSNYGVGSFTTTISQLVFSTISQAASDSLSVFAEEEPAYTSELVTWAVGEAEKFAALLKKCILASTAAAGGLRVASECVHVCMSHCYLLEATGLALSPVLIKYFRPFVEQALKTDLKRIEQSSSALASAEDWVLAYAPTSSRSSGQPPSSHSNLGLLQPKLSSSAHKFNSMVLELFEDVGPLEILQLDVLAVEGLIQEFNFYVNLLINALPGSVVTENLEGHRIVKLAETEAQQIALLANAILLADELLPRAVFKLSHSTKGDESQRKGSEKQRELKKRLQREVDHLRDSFCRQHALELIFTEEGEARLNALIYLGMDGNVEQPEWFPSPIFQEIFAKLTEVASIAADVFVGRERFATVLLMRLAETVVLWLSDDQAFWEEVETGSTPLGPIGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIERAINALAATGLDPNSVLPEDEWFVEVSEISIKMLTGRAAFDSVEEDIPSPTSFVQT* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0826 750 SUPERFAMILY Cullin repeat-like 144 379 IPR016159 -
Pvu2g0826 750 Pfam Vps51/Vps67 36 114 - -
Pvu2g0826 750 Gene3D - 142 264 IPR042561 -
Pvu2g0826 750 PANTHER EXOCYST COMPLEX COMPONENT 8 9 748 IPR033961 GO:0000145|GO:0006887
Pvu2g0826 750 Coils Coil 199 219 - -
Pvu2g0826 750 Gene3D - 273 377 IPR042560 -
Pvu2g0826 750 Coils Coil 537 557 - -
Pvu2g0826 750 Pfam Exocyst component 84 C-terminal 152 363 IPR032403 -
Pvu2g0826 750 PANTHER EXOCYST COMPLEX COMPONENT EXO84A 9 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0826 Pvu-Chr2 11926126 11932291 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0826 K19986 - gmx:100818886 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0826 2 11926126 11932291 Pvu2g0826 2 11926126 11932291 ECH