Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0803 ATGGCCACCAACACTCATTTCATCCTTTCACTCCCACCACGTTACGCCTTTTCTATTTCCTCTTCTTCTTTCCCGTTTCTTCCAACAAACACCACACTCTCTTTCTCTCTCCTTCGCCTTCGATCCCTTCCTCTTTCCCTCAATTTCCGTGCCTCCTTCTCCTTCAAGTCCCCTACCTCAACCATTCGCGCATTCTCCGACGCCGAGGAGGACGACGAAGAAGAAGATGACGATGAAGAAGAAGACGAAGATGAAGACGATGACGTTGCTGCCGACGAATACGACGACGTATCCGCTGATGCTCCCGACGACGATGCCGGTGTGTTCGCTCGCCACGACGGATTCAAGTGGCAGAGAGTCGAGAAGCTCTGCAACGAAGTCAGGGAGTTCGGCGCGGATATCATCGACGTCGACGAGCTGGTCTCCGTCTACGACTTTCGCATCGACAAGTTTCAGCGGCAGGCGATACTGGCGTTTCTGAGAGGCTCGTCGGTGGTGGTTTCCGCTCCGACGAGCAGCGGCAAGACGCTGATTGCGGAAGCCGCGGCGGTGGCCACGGTGGCTCGGGGACGGCGAATATTCTACACGACGCCGCTCAAGGCGTTGTCCAATCAAAAGTTTCGCGAATTTCGTGAGACTTTTGGTGACAGTAATGTTGGCCTTCTTACGGGTGATTCTGCCGTGAACAAGGATGCTCAGGTTTTGATTATGACCACGGAGATATTGCGCAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGACATGGACTTGTAAATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTCTGGGAGGAGATTGTTATTTATTGCCCAAAAGTAGTTCAACTAATTTGCCTGTCAGCAACTGTTGCAAATCCTGATGAGTTGGCTGGCTGGATTGGTCAGATTCATGGTGAAACTGAATTGGTAACATCGTCAAAACGCCCAGTTCCATTGACTTGGCATTTCTCTATGAAGAATTCCTTATTACCACTTCTTGACGAGAAAGGAACACATATGAACAGGAAGCTGTCATTCAATTATTTACAACTTCAAGCTGCAGGGGCTAAAGCTTACAAGGATGATTGGTCTAGAAAAAGGAATTCCCGGAAACGGGGATCACGCTTTAGCTACGATAGTGATGATAGCATGTTTGAACAACGTTCTCTTTCAAAGAATGATATAAATGCCATTCGTCGATCACAAGTTCCTCAAGTAATTGATACATTATGGCAACTTCAGTCCAGAGATATGCTGCCAGCTATTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCAGCTGTGCAATATCTAGAAAATTGCAAACTTTTAGATGAGTGTGAATCAAGTGAGGTTGAACTAGCCTTGAAGAAGTTCCGCAAGCTGTATCCTGATGCTGTCAGAGAATCATCTATAAGAGGACTTTTGCAAGGGGTTGCCGCACATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATAGAAGAGCTGTTTCAAAGAGGACTTGTTAAGGTTGTTTTTGCTACAGAAACCCTGGCTGCTGGAATCAATATGCCTGCCAGAACAGCTGTTATTTCATCCCTCAGCAAAAGGGGTGATAGTGGGCGTATACCATTAAGCTCAAACGAACTGCTTCAGATGGCTGGGCGTGCAGGACGCAGAGGCATTGATGAAAGTGGTCATGTAGTGCTCATCCAAACTACTAATGAAGGTGCTGAGGAGGGCTGCAAAGTTCTTTTTGCTGGACTAGAGCCTCTAGTGTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCCATTCAGTGGTCAAATGAATCAGGTAACATGAAACCTTCCACGGGGAGAACTTTGGAAGAAGCTAGGAAATTAGTTGAGCAGAGTTTTGGGAATTATGTTAGTAGCAATGTAATGCTGGCTGCTAAAGAGGAACTTGATAAAATTGAGAAAGAAATTAAGTTGCTGATGTTAGAAACTACTGATGAAGCTGTAGATAGAAAAACCAGGAAGGCCTTAGCACCACGGCAATACAAGGAAATTGCAGAATTGCTGGAAGATTTAAGATCAGAAAAGCGTGTTCGGTCTAAATTGCGCAAACAGGTGGAAGCAAAGAGAATGTCTGCCCTGAAACCTTTGTTGGAGGAGCCCGAAAGTGGACATTTACCATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTTGAATATTCAATTCCTGCTGTGTTTTTGGGCAAGGTTGACTCCCTCGATGCTTCAAAACTCAAAACTATGATTACTTCTGTTGATTCTTTTGCATTGAATTTAGCAGAAGTAGAGCCAAGTGTTGCAGATTCTGCTGCACGGAATAAAGATCTTAAACCTTCATATCATGTGGCTCTTGGTTCAGATAACACTTGGTATCTATTTACAGAAAAGTGGGTTAAGACGGTATATGGGACAGGCTTTCCTAATGTTCCATTGGCTCAAGGGGATGCTCGACCTCGAGAAATTATGAGCACTCTCCTTGATAACGGTGATATGAATTGGGATAAGCTTTCTCACTCTGAGCATGGTGGTTTATGGTTCATGGAAGGATCTCTTGATACATGGTCTTGGAGCTTAAATGTTCCTGTTTTGAGTAGCTTGTCAGAAAATGACGAGCTACTACTAAAGTCTCAAGATTACAAAGATGCCATTGAATGTTACAAGGATCAGAGAAATAAAGTTGCACGGTTGAAGAAAAAAATATCTCGTAGTGAAGGCTATAAAGAATATTTTAAAATTCTAGACGCAGTCAAGTTTGTTGAGGAGAAAATCAAGCGCCTGAAGAATAGATCTAAACGTTTGATTAATAGGATCGAACAGATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGATTAGCAATGTCATTCATGAAATCAGAGCCTTAGATATTAATACACATGTCATATTTCCACTTGGTGAAACCGCTGGTGCAATTCGAGGAGAAAATGAGCTATGGCTTGCGATGGTTCTTCGCAATAAAATTTTACTAGATCTAAAACCTCCACAACTCGCTGCAGTGTGCGCAAGTTTAGTGTCTGTGGGTATCAAAGTCCGACCCTGGAAAAATAACAGTTACATTTACGAGCCTTCCGCAACTGTAACCAAATTTATAACCTTATTAGATGAACAAAGAAATGCCTTATTGGCATTGCAGGATAAACATGGGGTGACAATCACTTGCTGTTTGGATAGCCAGTTTTGTGGCATGGTTGAGGCCTGGGCTTCTGGGTTGACTTGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGCGATTTAGCTCGTCTCCTTCGCCGGACCATTGATATCTTAGTTCAGATTCCAAAGTTGCCAGATATTGATCCATTGTTGCAGCGCAATGCAAAGGCTGCTTCTGCTGTCATGGATCGGCCTCCGATAAGTGAACTTGTGGGGTAA 3498 0.4391 MATNTHFILSLPPRYAFSISSSSFPFLPTNTTLSFSLLRLRSLPLSLNFRASFSFKSPTSTIRAFSDAEEDDEEEDDDEEEDEDEDDDVAADEYDDVSADAPDDDAGVFARHDGFKWQRVEKLCNEVREFGADIIDVDELVSVYDFRIDKFQRQAILAFLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGHGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKVVQLICLSATVANPDELAGWIGQIHGETELVTSSKRPVPLTWHFSMKNSLLPLLDEKGTHMNRKLSFNYLQLQAAGAKAYKDDWSRKRNSRKRGSRFSYDSDDSMFEQRSLSKNDINAIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECESSEVELALKKFRKLYPDAVRESSIRGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRIPLSSNELLQMAGRAGRRGIDESGHVVLIQTTNEGAEEGCKVLFAGLEPLVSQFTASYGMVLNLLAGVKAIQWSNESGNMKPSTGRTLEEARKLVEQSFGNYVSSNVMLAAKEELDKIEKEIKLLMLETTDEAVDRKTRKALAPRQYKEIAELLEDLRSEKRVRSKLRKQVEAKRMSALKPLLEEPESGHLPFLCLQYRDSEGVEYSIPAVFLGKVDSLDASKLKTMITSVDSFALNLAEVEPSVADSAARNKDLKPSYHVALGSDNTWYLFTEKWVKTVYGTGFPNVPLAQGDARPREIMSTLLDNGDMNWDKLSHSEHGGLWFMEGSLDTWSWSLNVPVLSSLSENDELLLKSQDYKDAIECYKDQRNKVARLKKKISRSEGYKEYFKILDAVKFVEEKIKRLKNRSKRLINRIEQIEPSGWKEFMQISNVIHEIRALDINTHVIFPLGETAGAIRGENELWLAMVLRNKILLDLKPPQLAAVCASLVSVGIKVRPWKNNSYIYEPSATVTKFITLLDEQRNALLALQDKHGVTITCCLDSQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDILVQIPKLPDIDPLLQRNAKAASAVMDRPPISELVG* 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0803 1165 SMART DSHCT_2 990 1164 IPR012961 -
Pvu2g0803 1165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 580 IPR027417 -
Pvu2g0803 1165 MobiDBLite consensus disorder prediction 67 90 - -
Pvu2g0803 1165 Pfam DSHCT (NUC185) domain 994 1160 IPR012961 -
Pvu2g0803 1165 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 414 613 IPR001650 -
Pvu2g0803 1165 SMART helicmild6 465 567 IPR001650 -
Pvu2g0803 1165 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 47 1161 - -
Pvu2g0803 1165 Coils Coil 943 963 - -
Pvu2g0803 1165 Coils Coil 656 676 - -
Pvu2g0803 1165 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 156 320 IPR014001 -
Pvu2g0803 1165 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 47 1161 - -
Pvu2g0803 1165 MobiDBLite consensus disorder prediction 62 90 - -
Pvu2g0803 1165 Gene3D - 328 596 IPR027417 -
Pvu2g0803 1165 SMART ultradead3 144 334 IPR014001 -
Pvu2g0803 1165 Coils Coil 896 926 - -
Pvu2g0803 1165 CDD SF2_C_Ski2 411 579 - -
Pvu2g0803 1165 Pfam DEAD/DEAH box helicase 151 303 IPR011545 GO:0003676|GO:0005524
Pvu2g0803 1165 Coils Coil 698 718 - -
Pvu2g0803 1165 Gene3D - 942 1157 - -
Pvu2g0803 1165 Gene3D - 109 327 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0803 Pvu-Chr2 11505108 11513001 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0803 K26077 - gmx:100780908 1942.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0803 2 11505108 11513001 Pvu2g0803 2 11505108 11513001 ECH