Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0799 ATGAGAAACTATTTTCACTTACTTTTCTTCACCCTATCCCTTCTGTTGGGCCAATCCAGACCCGACCCTGACCCACTTCAAGATTATTGTGTTGCTGATAACAAAGGTGAATTTTTTATTAATGGGGTGCCTTGTATCAACCCAGATAAAGTTTCACCATCCCATTTTGTGACATCTGCTTTGTCTAAGAATGGTAACACTAGTAACCCATTCGGCTTCAGTGTCACAGCCACCAACACTGTTAATCTTCCTGGGCTTAACACATTGGGCCTGGTATTGGTCCGGGTTGATATAGCGGGGAATGGGATTGTGCCACCTCACTCGCATCCACGGGCCTCCGAAGTGACCACTTGCCTCAAGGGTCAGCTTCTTGTGGGCTTTGTTGACACGAATAACCGTGTGTTTACCCAGAACCTGAAGCCCGGTGAGTCATTTGTGTTCCCAAAGGGCCTGGTACATTTCTTGTTCAATAGTAACTCAAGGGAACCAGCACTAGCTCTTTCTGGTCTAAATAGCCAGAACCCAGGTGCACAAATTGCATCACTTGCAACATTTGCTAGCAAGCCTTCTATTAATGATGAAATTCTCAAGAAGGGTTTCCAAATTACCGGCAGAGAAGTGGAAACCATTCGTAGAAACCTTGGAGGATGA 651 0.4547 MRNYFHLLFFTLSLLLGQSRPDPDPLQDYCVADNKGEFFINGVPCINPDKVSPSHFVTSALSKNGNTSNPFGFSVTATNTVNLPGLNTLGLVLVRVDIAGNGIVPPHSHPRASEVTTCLKGQLLVGFVDTNNRVFTQNLKPGESFVFPKGLVHFLFNSNSREPALALSGLNSQNPGAQIASLATFASKPSINDEILKKGFQITGREVETIRRNLGG* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0799 216 Gene3D Jelly Rolls 21 216 IPR014710 -
Pvu2g0799 216 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 215 - -
Pvu2g0799 216 Pfam Cupin 61 207 IPR006045 -
Pvu2g0799 216 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 1 MEMBER 1 7 215 - -
Pvu2g0799 216 CDD cupin_OxOx 22 214 - -
Pvu2g0799 216 SMART Cupin_1_3 59 208 IPR006045 -
Pvu2g0799 216 ProSitePatterns Germin family signature. 102 115 IPR019780 GO:0030145
Pvu2g0799 216 PRINTS Germin signature 107 127 IPR001929 GO:0030145
Pvu2g0799 216 PRINTS Germin signature 137 157 IPR001929 GO:0030145
Pvu2g0799 216 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Pvu2g0799 216 SUPERFAMILY RmlC-like cupins 52 214 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0799 Pvu-Chr2 11453633 11454320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0799 22 215 Miscellaneous Gene Families AT5G39130 43.939 2.77e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0799 - - gmx:100500154 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0799 2 11453633 11454320 Pvu2g0799 2 11453633 11454320 ECH