LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu2g0794	ATGAACGGGATGGAGTGCGCGGCGAAAGGGAGCGGAGCACGGTGCGGCGGTGCCGCCACGCGTCTCTGCGCTCGCTGCGAAGCCGTCGCTTATTGCTCTCTCGCTCACCAGATTGCACACTGGAGTCGTCACAAACACGAGTGTGATAGGTTGCAACAACAGATGAAGAGTGTTGAAGTACTCAACGATTTTCCCTTCACTTTCTCTCGCGAAGCCACGTTTCAGGAAGGTAGGTGTTCATTTTTGAGCCACAGAGGTCTTCATAAAGTGGGAATGTGGATGCATGAATGCGGTTGTGGGGCATCATCTGCTTCATTTGATTGTTTAGGGTTAAATAATGGTTGGGATCTCCCAAGTGTTTTATGTCCATGTGGGCCAAACTCTCTGGTATTAGAACAATTGCATAGTTGGAGAGACTACTATAGGTGGAGAAGCATCCCACTAGACTCGCCTGTTGCTTTGGTTCTTCATTGGCCGCTTACAATATATCATGCTGCTCATCTTGTTGGAATTACAGCCGTGAAACCTGAAATCAGTGAAAAGTTGTACATACATTACCTTGGACCCGAGAAAGAGCTGCTACAACTTGTTGTGTTTGGAGAATTACTGGCACTCTTCCCTGGTGTAGATATTCATATAGAACTTGTTGGACCTGCAATTCCTCCTGAAAGGGATGGCGAGAAAATTCACATTTCCAAGTATGCTTGTTGCAATGAAGATGAGTGTGAGTGCAAAATAGCAATTAAAAATACAGTTTTAGGAACAGAGTCTGGTTCATCAGTGACATTGCAGCTTTGGCCTGGATTCTATCATGACCGATATAGAGATATTGTTAAGGATTCCTCCCCTCACCTAATAATTGCTCCAAATGGAGGCATTGCTGCCTATTCCAGTTGGTTACCAAGTATTGAGTTAGTTGAAAAGATTGACGTCCCAGCTGTTTTTACTGATTATTGCGAGGAAGCATGTCATCTTGCAGCAAGTTGCATTAAGACTATATCTGACCGTCCTCTTAAATTGCCAGTTCAGTTAAATCCTTTCAGGCAGCCCATAGCCGTGGAAGACAGCGTGCTATTGCTTCCCTGCTACTCGAATTGCTTTCTTTTTGGGATCTAA	1116	0.4498	MNGMECAAKGSGARCGGAATRLCARCEAVAYCSLAHQIAHWSRHKHECDRLQQQMKSVEVLNDFPFTFSREATFQEGRCSFLSHRGLHKVGMWMHECGCGASSASFDCLGLNNGWDLPSVLCPCGPNSLVLEQLHSWRDYYRWRSIPLDSPVALVLHWPLTIYHAAHLVGITAVKPEISEKLYIHYLGPEKELLQLVVFGELLALFPGVDIHIELVGPAIPPERDGEKIHISKYACCNEDECECKIAIKNTVLGTESGSSVTLQLWPGFYHDRYRDIVKDSSPHLIIAPNGGIAAYSSWLPSIELVEKIDVPAVFTDYCEEACHLAASCIKTISDRPLKLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFGI*	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu2g0794	371	Pfam	MSS51 C-terminal domain	159	355	IPR046824	-
	Pvu2g0794	371	Gene3D	-	5	55	-	-
	Pvu2g0794	371	Pfam	MYND finger	13	48	IPR002893	-
	Pvu2g0794	371	ProSiteProfiles	Zinc finger MYND-type profile.	12	48	IPR002893	-
	Pvu2g0794	371	PANTHER	ZINC ION BINDING PROTEIN	4	371	-	-
	Pvu2g0794	371	PANTHER	ZINC ION BINDING PROTEIN	4	371	-	-
	Pvu2g0794	371	SUPERFAMILY	HIT/MYND zinc finger-like	14	53	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu2g0794	K24081		-	gmx:100808017	663.685

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g0794	2	11395434	11399402	Pvu2g0794	2	11395434	11399402	ECH