Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0791 ATGAGATTAAGAGTACTAAGAAGCTTTCTGTTCATTTTAACACTCTCTTCTCTATTTGTCGATGTATCTGTCTCAATATCTTTTCCACCAGCCGTTGGATTGCAAATAGCAAGACAATTCCCGTTGTGGCTTAGATTCATCAGATCGAGTAAATTGTTGTCCAGCTTCTGGAACAAACTCAAGTCATTCTTCACGTTCAAGGAGCTAAAACTTGGAGACATAGCTAAGGGTTTGTCTAATGTCAAAGACTATTTAGACCTCTTCGGCTACTTAAACTCCACTTCACACTCAAACTTCAGCGACTACTTCACACTCGATCTCCAATCCGCAATAATCAAGTACCAGAAAAATTTCAATCTCAACGTCACGGGGAAGCTCGACCGAAACACCTATAACGTGATATCACGGCCACGATGCGGTGTTCCCGACGTAGTCAACGGCACCACCACGATGAACTTGGGCGCATCCAACACGACGTCGTTTAAACCATGGTGGAAAGAGGGGAAGAGAGAACTGACCTACGCTTTTCACCCTGAGAACAACGTCACTAACGGCGTTAGGCTTCTGTTCCGAGATGCCTTCGACCGGTGGTCGAATGTCACGTTGTTGAAGTTCACGGAGACGACGAGGTTCAATGGTTCTGATGTGAAGATAGCGTTTGTGGTGTTCGATGGAAAAGGTGGAGCGGTGGGGGTTACGGACACGGACTATAGTGAGCATGTGGGGAACGTGTATTTGGACTCAGAGGAGGAGTGGGTGGTGCTTGGTGAGAACGAAGATGGTGACGTGGACTTGGAATCTGTGGTGATGCACCTGGTGGGTCACGTGCTAGGGTTAGGGCATTCCTCTGTGGAGGAGGCTGTTATGTACCCTATCGTGTCGAAGGAGAAGACTGAGTTTGCGTTGGATGACTTGCAGAGGATTCATCAAATATATGGTGTGAACTCTAAATAA 954 0.4675 MRLRVLRSFLFILTLSSLFVDVSVSISFPPAVGLQIARQFPLWLRFIRSSKLLSSFWNKLKSFFTFKELKLGDIAKGLSNVKDYLDLFGYLNSTSHSNFSDYFTLDLQSAIIKYQKNFNLNVTGKLDRNTYNVISRPRCGVPDVVNGTTTMNLGASNTTSFKPWWKEGKRELTYAFHPENNVTNGVRLLFRDAFDRWSNVTLLKFTETTRFNGSDVKIAFVVFDGKGGAVGVTDTDYSEHVGNVYLDSEEEWVVLGENEDGDVDLESVVMHLVGHVLGLGHSSVEEAVMYPIVSKEKTEFALDDLQRIHQIYGVNSK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0791 317 Pfam Putative peptidoglycan binding domain 79 133 IPR002477 -
Pvu2g0791 317 SUPERFAMILY PGBD-like 81 144 IPR036365 -
Pvu2g0791 317 PRINTS Matrixin signature 134 147 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pvu2g0791 317 PRINTS Matrixin signature 190 205 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pvu2g0791 317 PRINTS Matrixin signature 268 293 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pvu2g0791 317 PRINTS Matrixin signature 300 313 IPR021190 GO:0004222|GO:0006508|GO:0008270
Pvu2g0791 317 SMART col_5 161 314 IPR006026 GO:0006508|GO:0008237|GO:0008270
Pvu2g0791 317 PANTHER MATRIX METALLOPROTEINASE 26 314 - -
Pvu2g0791 317 PANTHER MATRIX METALLOPROTEINASE 26 314 - -
Pvu2g0791 317 Gene3D Collagenase (Catalytic Domain) 71 317 IPR024079 GO:0008237
Pvu2g0791 317 Pfam Matrixin 168 313 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Pvu2g0791 317 ProSitePatterns Matrixins cysteine switch. 137 144 IPR021158 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Pvu2g0791 317 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 130 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0791 Pvu-Chr2 11311145 11312098 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0791 - - gmx:100782021 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0791 2 11311145 11312098 Pvu2g0791 2 11311145 11312098 ECH