Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0786 ATGTCCGATCCTTCGAGGGGTCGCGTTACCATCACTCTAGGGCGCAGTGGTCAGGTTGTGAAGAGGGATGTATCTTCTGTAGATGTTTCTTCTTTCTCTTCTCTTCCCTCAGCTGGCACGAAGCGGTCTGTAAGAGACAGGATAGGAAATAATGCAGATGGTTCTGTGTGGCACGGAAATGGACTTGGCGGCAATAAACGACAACGAGGAGATTTAAGCATACAAAATAGACTGGATGGCAATGATCTTCGGTTGAAGCTCATGCAAAAAAGTGCATCTAGGCAAGCTGACAACAATGGTAGTAAGAGGCATATGGATCTCCGTGAAAAACTTTCAAAGACTACTCACCCACTGACAAATAGTTTTAATACAAAGCAGCGCATGCCAGAATCAAGGGAAACAAGTTTGTTGAGGCAAATTCCCTCTGCTAGAAGTTCTGATGATTTAATGCGCATGGAATCCATGAGAAGCTCGTACTCTCCTTGGACATTGGATCATATAAGGAGAAGATCACCAGAAGGGTTTCCAAGTACTTCCAGGGGTATTTCCCCGCAAAGGGATGTCCAAGACCTACAGAGAAGGCCATTAAACAGGACATATGATGGTGTCAGGCCAGGTCCATATGTAAGTAGGGATGCTCTTGATACTTCGAGGCCTCCAGTAAGTACACCTCAATCTTTCATGCCACGCTCCTCAATGTCCACATTGCCTCCAGTAACTGCCAAGCCTGTAGCATCTCATGCTGCTGGCCAACTTCCTCCATCAAGTAGTGTTGCCCAAAGGTCATCGTATGTGGGTGATGAACAAGTACAGCAATCAAACCAGACTGTGGATGGCCTGTTACATGCACTAGGACTTCAAAAATATGCCATTCTCTTCAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAGATGGGAGAAAATGATCTCAAAGAGTTAGGGATTCCTATGGGGCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCCCGTACCAAGCGTCAACAATGA 1011 0.459 MSDPSRGRVTITLGRSGQVVKRDVSSVDVSSFSSLPSAGTKRSVRDRIGNNADGSVWHGNGLGGNKRQRGDLSIQNRLDGNDLRLKLMQKSASRQADNNGSKRHMDLREKLSKTTHPLTNSFNTKQRMPESRETSLLRQIPSARSSDDLMRMESMRSSYSPWTLDHIRRRSPEGFPSTSRGISPQRDVQDLQRRPLNRTYDGVRPGPYVSRDALDTSRPPVSTPQSFMPRSSMSTLPPVTAKPVASHAAGQLPPSSSVAQRSSYVGDEQVQQSNQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0786 336 MobiDBLite consensus disorder prediction 216 239 - -
Pvu2g0786 336 ProSiteProfiles SAM domain profile. 272 335 IPR001660 GO:0005515
Pvu2g0786 336 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Pvu2g0786 336 MobiDBLite consensus disorder prediction 27 70 - -
Pvu2g0786 336 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Pvu2g0786 336 Gene3D - 274 336 IPR013761 -
Pvu2g0786 336 MobiDBLite consensus disorder prediction 114 142 - -
Pvu2g0786 336 SUPERFAMILY SAM/Pointed domain 273 328 IPR013761 -
Pvu2g0786 336 MobiDBLite consensus disorder prediction 91 152 - -
Pvu2g0786 336 MobiDBLite consensus disorder prediction 170 265 - -
Pvu2g0786 336 SMART SAM_4 269 334 IPR001660 GO:0005515
Pvu2g0786 336 MobiDBLite consensus disorder prediction 250 265 - -
Pvu2g0786 336 Pfam SAM domain (Sterile alpha motif) 272 328 IPR001660 GO:0005515
Pvu2g0786 336 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0786 Pvu-Chr2 11159978 11168511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0786 238 328 Glycosyltransferase AT3G07170 46.392 1.21e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0786 - - gmx:100797199 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0786 2 11159978 11168511 Pvu2g0786 2 11159978 11168511 ECH