Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0745 ATGGCGGATTCCGCCTCTTCCCCCGCAACCCTACCTCCCAATCCCCAACCCTCCGAATCCGCACCTCCCAACCCACCCGATCCACTCCCCCAATCCGTAACACCGCCTTCATCTACGCCCCTAGCTGCAAACCCTAACCCCAATCCAACGCTGCTCCCCCCGCCGCCAGCGCTACTCTTTCCGGCCGGCACTCCGCCACAGGTCCCTGGCCTTCTCCCTCCCTCATTCCGCCCGCTTGCTCCTCAGGTGCCACAATTCTCCCCCGTCCCGGCGCCCCACCCCGTCTACCAAAACCCTGCCGTTCCTCCTCCCGGTGTGGCCAGCGCCGCGCCGCCGCCGCAGATGCAGCCGATGATGTCATACCAGGTTCAACCCGGTAACCCGGGTATGCGACCCTTTGCTCCGATCCCTAACGGTTACGCTCCAGCTCCGACCGTAACTCCCGCGGGAATGCCTCGTTACCCCCCTCCTTATGGAACTATGGTTCGTCCTGTCTTTCCTCCACGCCCTCCTGGAGCAGTTAACATACCTCCAATATCACGCCCACCAGTAGCAGGGATCCCTACTGTTCGCCCAATTATTCCTCCTGTTGTCAGACCTATGGTAGCCCCTAGTGTTACCCCAGCTGAGAAGCCTCAAAACACAGTTTACATTGGCAAGATTGCATCAACTGTGGAAAATGAGTTCATGCTCTCTCTCCTTCAATTATGTGGAACTATCAAGACCTGGAAACGTCCTCAGGATTTATCAACTGGAACTCCTACCAGTTTTGGGTTTTATGAGTTTGAGTCGGCAGAAGGGGTTCTCCGTGCCTTGCGACTCCTTACTAAATTGAATATTGACAGGCAAGAACTGAAGGTCAACGTGAATCAAGCTATGAAAGAACATCTGGAGCGGTATGTTCAGAAAAAAGCTGAGAACTTGAACAAAGAAACTCAGGTAGGTGTAGTTGAAAAGGATGATGGCGAACAAACTTCTAACTCAAATGAGGGTACAAAGGCTGAGAAAGAATCCTCAAATAAAGTGGACAGTGAATCAGTAAATAAGGATTCCCATGATGTGACAAACTTTGGGATTGTCACTGACGAAGATAGAGAAGGGGATCGAGAGGCTTTAGAAAAGATCACAAAGATGATAGAGGAAAGGTTGAAGACAAGACCTTTGCCTCCTCCACCTGCACAGCCAAGTTGTGATGGTTCTGTGAATTTAACCTCAGAACAACCTGTTAAAACAAGAGAGGGAGATTCTGTGGTTGATACAGATAAGAATGAATCTGCTGAAAATAAAAGTGAGAAAGAGACTAACAATGATAAACCAAGCAGTGAACATGATAGGTCTGAAAGCCCTGATAGAAGGCATGATAGAAAAAGCAGAGAGAGGGACCGGGATAGGGAACTAAAGCGAGAAAAGGAAAGAGAACTTGAAAGATATGAGAGAGAAGCAGAGCGGGAACGTGTTCGGAAAGAGAGAGAACAAAGACGAAGAATTGAGGAGGCTGAACGTCAATATGAAGCATATTTGAAGGAATGGGAGTATAGAGAACGAGAGAAAGAGAAAGAGCGCCAGTATGAAAAAGAGAAGGAGAAGGAAAGGGAACGTAAAAGGAGAAAGGAGATACTTTATGATGAAGAGGATGAGGATGAAGATTCTAGGAAGAGGTGGCGCAGAAGTGTGATAGAGGAGAAGAGAAAGAAGAGGTTGCGGGAGAAGGAAGATGACCTGGTTGACAAACAAAAGGAAGAGGATGAAATTGCCGAGGCGAAGAAGTCTGAGGAGGAACAAAAGCGTCAGAGAGATGCTTTAAAACTATTAACTGAGAATGTGGTAAATGGTGGTAATGAAAATATGATTATTGAAGAGGTCACTAATGAAGTCAAAAGCAATGTTACTGAACAAGATACTGTAGCTGATTATAGCCGTGAAGATCATACTGGTGATGGGAATGCACTAAATGTCACCAGTGATGAATTAACCATAGTTGCTCCAACTGATACACAAGGTAATGCTCCTACAAAAAAATTGGGATTTGGCCTAGTTGGTTCAGGGAAAAGAACAACTGTCCCTTCTGTTTTCCATGAAGAGGAGGATGATGATGCACACAAGGACAAAAAAATGAGGCCATTGGTTCCAATTGATTACTCAACTGAAGAATTGGAGGCTGTTCAACCTACAGTGCCTGGGCCAACACCACCAAATTTGGCTGCTGCTGCAGAATTTGCGAAGCGTATATCGAGTACAAATTTCAAGGAAGATAAGCTGGATGGAGAACGGGATAGAAGTAGGCGTTCAAATGATAAGTCTAGCCACCGGGATAGGGACAGAAATGATGAAGATGGTACTCACAACAGAGATGAAAACAAGGACAGAATTCCTGAACGTGACAGGGATCGAGATCATGGATCGGATAAACTTAAGACTTCAGATAACAAGAGGCTTTTGGATGCTAAACAATTGATTGATATGATACCAAAGACCAAGGAGGAGTTGTTCTCATTTGAGATAGACTGGGCAGTATATGATAAGCATCAACTACATGATAGAATGAGACCGTGGATTTCAAAGAAAATCAAGGAGTTTTTGGGGGAAGAAGAGACTACATTGATAGATTATATTGTTTCCAGTACACAAGAACATGTGAAAGCATCCCAAATGCTTGAGCGTCTTCAGATTATTTTGGATGAAGAGGCTGAAATGTTCGTTCTGAAGATGTGGAGGATGCTTATCTTTGAAATAAAGAAGGTAGAGACAGGTTTGGGTCTGAGGTCAAAATCATGA 2775 0.4584 MADSASSPATLPPNPQPSESAPPNPPDPLPQSVTPPSSTPLAANPNPNPTLLPPPPALLFPAGTPPQVPGLLPPSFRPLAPQVPQFSPVPAPHPVYQNPAVPPPGVASAAPPPQMQPMMSYQVQPGNPGMRPFAPIPNGYAPAPTVTPAGMPRYPPPYGTMVRPVFPPRPPGAVNIPPISRPPVAGIPTVRPIIPPVVRPMVAPSVTPAEKPQNTVYIGKIASTVENEFMLSLLQLCGTIKTWKRPQDLSTGTPTSFGFYEFESAEGVLRALRLLTKLNIDRQELKVNVNQAMKEHLERYVQKKAENLNKETQVGVVEKDDGEQTSNSNEGTKAEKESSNKVDSESVNKDSHDVTNFGIVTDEDREGDREALEKITKMIEERLKTRPLPPPPAQPSCDGSVNLTSEQPVKTREGDSVVDTDKNESAENKSEKETNNDKPSSEHDRSESPDRRHDRKSRERDRDRELKREKERELERYEREAERERVRKEREQRRRIEEAERQYEAYLKEWEYREREKEKERQYEKEKEKERERKRRKEILYDEEDEDEDSRKRWRRSVIEEKRKKRLREKEDDLVDKQKEEDEIAEAKKSEEEQKRQRDALKLLTENVVNGGNENMIIEEVTNEVKSNVTEQDTVADYSREDHTGDGNALNVTSDELTIVAPTDTQGNAPTKKLGFGLVGSGKRTTVPSVFHEEEDDDAHKDKKMRPLVPIDYSTEELEAVQPTVPGPTPPNLAAAAEFAKRISSTNFKEDKLDGERDRSRRSNDKSSHRDRDRNDEDGTHNRDENKDRIPERDRDRDHGSDKLKTSDNKRLLDAKQLIDMIPKTKEELFSFEIDWAVYDKHQLHDRMRPWISKKIKEFLGEEETTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFVLKMWRMLIFEIKKVETGLGLRSKS* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0745 924 MobiDBLite consensus disorder prediction 311 498 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 514 552 - -
Pvu2g0745 924 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 923 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 90 115 - -
Pvu2g0745 924 SUPERFAMILY RNA-binding domain, RBD 156 288 IPR035979 GO:0003676
Pvu2g0745 924 SMART pwi_2 840 913 IPR002483 GO:0006397
Pvu2g0745 924 ProSiteProfiles PWI domain profile. 827 924 IPR002483 GO:0006397
Pvu2g0745 924 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 214 292 IPR000504 GO:0003723
Pvu2g0745 924 SMART rrm1_1 215 288 IPR000504 GO:0003723
Pvu2g0745 924 Coils Coil 460 509 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 744 808 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 397 411 - -
Pvu2g0745 924 Gene3D PWI domain 803 919 - -
Pvu2g0745 924 SUPERFAMILY PWI domain 846 911 IPR036483 GO:0006397
Pvu2g0745 924 Coils Coil 512 540 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 1 76 - -
Pvu2g0745 924 Coils Coil 567 607 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 567 598 - -
Pvu2g0745 924 Gene3D - 206 324 IPR012677 -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 662 808 - -
Pvu2g0745 924 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 923 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 412 498 - -
Pvu2g0745 924 Coils Coil 275 295 - -
Pvu2g0745 924 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 216 285 IPR000504 GO:0003723
Pvu2g0745 924 MobiDBLite consensus disorder prediction 90 111 - -
Pvu2g0745 924 CDD RRM_RBM25 215 297 IPR034268 -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 334 384 - -
Pvu2g0745 924 Pfam PWI domain 847 910 IPR002483 GO:0006397
Pvu2g0745 924 MobiDBLite consensus disorder prediction 10 76 - -
Pvu2g0745 924 MobiDBLite consensus disorder prediction 688 710 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0745 K12822 - gmx:100809428 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0745 2 10099952 10106643 Pvu2g0745 2 10099952 10106643 ECH