Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0728 ATGTTTGGAGGCAACAATGGAAATCGCTTGCTTCCTGTTTTCTTGGATGAGACTCAATTTCGGCATCAAACAAATGCGTCAAATCAGTTGCAGTTGTTTGGAAATTTACAAGCTGGATGTAGTGTTGACCCAGTTAATTACTTCGGAAATGAGCATGTCAGCTCCATGATTCAGCCTAATAAACGCAGCAAGGAAATGGAAGATATATCAAAACAAAGACTTCAGATTTCCTTAAATTACAATGTCAATCAAAAGGATGCTGATCGATTAGCAAGCATTCAAAATCCCAACCCTGTGTCCACAGGATTGAGGCTTTCATATGACGATGATGAGCATAACTCATCTGTTACTTCTGCGAGTGGCAGCATGACTGCCACACCGTCTATCATATTGTCTCTTGGTGATAATATCAGAACTGAGCTTGATAGACAGCAAGAAGAGTTGGATCAGTATATTAAACTTCAGAAGGAACAGTTGTCAAAAGGGGTGAGAGACATGAAGCAAAAACACATGACTGCTCTCCTCTCCTCCATTGAGAAAGGTATTAGCGCAAAGCTAAAGGAAAAAGATGTGGAGATAGAAAACATGAATCGGAAAAACAGGGAGCTGGCAGAAAGAATAAAGCAGGTGGCTATTGAAGCACAAAGCTGGCATTACAGAGCAAAGTATAATGAGTCAGTTGTGAATGCATTGAGGAACAACCTGCAGCAGGCAATTTCTCAAGGTGTTGAACAAGGGAAGGAAGGGTTTGGAGATAGTGAAGTTGATGACGATGCCTCGTATATAGATCCTAACAACTTCCTAAATTTACCGGGTGCGCCTATAAACTCTACTCACAAGACCTACCAAAATGCAGAGAATCTGACTTGCAAAGCTTGCAAGGCAAAGGCAGTTTCCATGTTGTTGATGCCTTGTAGGCACCTGTGCTTGTGTAAGGATTGTGAGGGATTTATCAATGTTTGTCCCGTTTGCCAATTGATAAAAACTGCAAGTGTTGAGGTGTATCTGTCTTAA 1014 0.4122 MFGGNNGNRLLPVFLDETQFRHQTNASNQLQLFGNLQAGCSVDPVNYFGNEHVSSMIQPNKRSKEMEDISKQRLQISLNYNVNQKDADRLASIQNPNPVSTGLRLSYDDDEHNSSVTSASGSMTATPSIILSLGDNIRTELDRQQEELDQYIKLQKEQLSKGVRDMKQKHMTALLSSIEKGISAKLKEKDVEIENMNRKNRELAERIKQVAIEAQSWHYRAKYNESVVNALRNNLQQAISQGVEQGKEGFGDSEVDDDASYIDPNNFLNLPGAPINSTHKTYQNAENLTCKACKAKAVSMLLMPCRHLCLCKDCEGFINVCPVCQLIKTASVEVYLS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0728 337 Gene3D - 89 157 - -
Pvu2g0728 337 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 336 - -
Pvu2g0728 337 Coils Coil 186 213 - -
Pvu2g0728 337 Pfam Zinc finger, C3HC4 type (RING finger) 287 325 - -
Pvu2g0728 337 Coils Coil 134 161 - -
Pvu2g0728 337 Gene3D Death Domain, Fas 158 298 IPR011029 -
Pvu2g0728 337 Gene3D - 77 333 - -
Pvu2g0728 337 PIRSF SBP1_RNase_bind 1 337 IPR017066 -
Pvu2g0728 337 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 336 IPR017066 -
Pvu2g0728 337 ProSiteProfiles Zinc finger RING-type profile. 290 325 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0728 Pvu-Chr2 9641070 9645706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0728 290 325 Miscellaneous Gene Families AT2G21380 44.444 1.72e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0728 K19042 - gmx:100791550 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0728 2 9641070 9645706 Pvu2g0728 2 9641070 9645706 ECH