Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0657 ATGAAGAGGAACAGAAGTTTTTCCTTACTCTTTTTCCTCTCCTTGTTGGTGATTATCTTTGTCACCTTCTCTACCGTTTCTGTGGAAGCAAGGAAGAAAAATCTTCACAAACGTAACAATCATAAAGATGGTCACAGTGGCAATGGCCACGGTCGAGGGTCACATTCTCCACGTCCAACACCAACCCCTCCTCCTTATTATGGTTCTCAAGGGAGCATGTTTGACGTTTTGTCTTTTGGTGCCAAGGGTAATGGAGTTTCTGATGATTCAGAGGCACTTGTAGCTGCATGGAAAGGTGCATGTAAAGTTGCTGGTGCTACAGTAAAAATTCCAGCACAACTCAAGTTCCTCATCAAACCTGTTACTTTACAAGGCCCTTGTATGCCTGACCTTACTCTTCAGATAGATGGAACTCTATTGGCACCTCCTCAAATATCTTCTTGGCCAACATCCAGTTTGTTTCAGTGGATAAATTTCAAGTGGGTGCAGAACTTCACCATCAAAGGTTCTGGCACTGTTGATGGCCAAGGTTATTACTGGTGGAAATCCTCAGAATTTTATGACATACAGAAGAAGAGCTATTCCAAAAATATTCCAAGCATGAAACCAACAGCAATAAGATTTTACTCCAGCAACTCTGTCACAGTTCGTGATATCAGAATCATAAACAGTCCTCTGTGCCATCTAAAATTTGACAACTCAAAGGGGATTGAAGTTGACAACATTACAATATCCTCCCCAGAGAGTAGCCCAAACACTGATGGCATTCACTTACAGAACACACAGGACGTGGAAATTAAACGTTCTATCATTGCAACAGGAGATGACTGTGTATCCATCCAAACCGGTTGCTCTAATATTCATGTCCACCACATTAATTGTGGCCCTGGACATGGTATAAGTTTGGGAGGATTAGGGAAGGACAAGAGTGCAGCATGTGTGTCTGACATCATTGTTGAGGATATCTCTATGAAAAACACTCTATATGGAGCAAGAATCAAAACATGGCAGGGAGGCTTTGGTATGGTTAAAAACGTGTCATTTTCCAGAATTCAAGTCTACGATGTTATGTTTCCAATAATGATAGACCAATACTACTGTGACAAGCAAAAGTGCAAGAACCACACAAGCACTGTGGTGATTTCTGGGGTTAAGTTTGATGAGATAAGTGGAACTTTTGGGATACAACCTGTTCATCTAGCTTGCAGCACTTCCATACCTTGCACAGATGTTGATTTAACTGACATTCAACTGAGTCCCTCCCCTAAGTATAAAGGTTTGCAACAAGCTGTGTGCTGGAACTCTTATGGAAAATCACAAGGCCCCTTGCTACCTTCAAGCATTGATGATTGCTTGAAAAGTGGTGGTGGATTAATCAAGAGGATAGCAAGGTCACATGATAGAGTGTGTTACTGA 1416 0.4167 MKRNRSFSLLFFLSLLVIIFVTFSTVSVEARKKNLHKRNNHKDGHSGNGHGRGSHSPRPTPTPPPYYGSQGSMFDVLSFGAKGNGVSDDSEALVAAWKGACKVAGATVKIPAQLKFLIKPVTLQGPCMPDLTLQIDGTLLAPPQISSWPTSSLFQWINFKWVQNFTIKGSGTVDGQGYYWWKSSEFYDIQKKSYSKNIPSMKPTAIRFYSSNSVTVRDIRIINSPLCHLKFDNSKGIEVDNITISSPESSPNTDGIHLQNTQDVEIKRSIIATGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSAACVSDIIVEDISMKNTLYGARIKTWQGGFGMVKNVSFSRIQVYDVMFPIMIDQYYCDKQKCKNHTSTVVISGVKFDEISGTFGIQPVHLACSTSIPCTDVDLTDIQLSPSPKYKGLQQAVCWNSYGKSQGPLLPSSIDDCLKSGGGLIKRIARSHDRVCY* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0657 471 Pfam Glycosyl hydrolases family 28 106 426 IPR000743 GO:0004650|GO:0005975
Pvu2g0657 471 MobiDBLite consensus disorder prediction 34 65 - -
Pvu2g0657 471 PANTHER - 18 458 - -
Pvu2g0657 471 Gene3D - 66 451 IPR012334 -
Pvu2g0657 471 SUPERFAMILY Pectin lyase-like 65 447 IPR011050 -
Pvu2g0657 471 PANTHER PECTIN LYASE-LIKE SUPERFAMILY PROTEIN 18 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0657 Pvu-Chr2 7121655 7124367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0657 1 470 Glycoside Hydrolase AT3G26610 60.669 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0657 K01213 - gmx:100803027 793.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0657 2 7121655 7124367 Pvu2g0657 2 7121655 7124367 ECH