Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0555 ATGTCGATTTCGGGCATCCAGGGGCAGCCTCTTGAGGTTACGGTTGTGTCGTGCTCCAAGCTGAAGGACACAGAATGGATTTCAAGGCAAGATCCCTACGTTTGTGTTGAGTATGGCAGCACCAAGTTCCGCACCAGAACCTGCACAGACGGCGGCAAAAACCCCGTCTTCCAGGAAAAGTTCGTCTTTCCCCTCATCGAAGGCCTTCGGGAGATCAACGTTGTTGTTTGGAACAGCAACACTCTCACCTTCGACGATTTCATCGGAAGCGGAAAGATTCAGCTCCACAAGGTTCTCTCTCAAGGCTTCGACGACTCTGCTTGGCCCCTTCAGACCAAATCTGGCAGATATTCTGGTGAAGTGAAAGTCATACTGCATTACGTAATTGCGAATCAAAGGAAATCAGGGTCAAGCCATGCTCCTTCTGCACCTCCCTATGGGTCAACACCAACTCCTCCTTACCCTTCTTATTCTAATCCTTCTGCTACTTCCTACCCACCTCCTTCTACTTCCTCATATCCACCACATTCCTATCCAAATCCTTACCATACAAATGGATCATACCCACCGGTGGCATCCACAGCCTCATACCCACCACCTCCTGCACCTTACTCACCATATCCCTCACATTCATCTCCCTATCCACAGCCCTCATACCCTCCATCATCTACCTATCCACCCTCCACATATCCTCCTCCCTCCTCCTATCCGCCTGCTTCAGCTTATCCACCACCTTCGTATCCACCGCCTGCAGGTTATCCTCCTGGAATATACCCTCCACCGCCTTACTGA 792 0.5076 MSISGIQGQPLEVTVVSCSKLKDTEWISRQDPYVCVEYGSTKFRTRTCTDGGKNPVFQEKFVFPLIEGLREINVVVWNSNTLTFDDFIGSGKIQLHKVLSQGFDDSAWPLQTKSGRYSGEVKVILHYVIANQRKSGSSHAPSAPPYGSTPTPPYPSYSNPSATSYPPPSTSSYPPHSYPNPYHTNGSYPPVASTASYPPPPAPYSPYPSHSSPYPQPSYPPSSTYPPSTYPPPSSYPPASAYPPPSYPPPAGYPPGIYPPPPY* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0555 263 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 3 263 - -
Pvu2g0555 263 SMART C2_3c 10 107 IPR000008 -
Pvu2g0555 263 MobiDBLite consensus disorder prediction 193 241 - -
Pvu2g0555 263 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Pvu2g0555 263 MobiDBLite consensus disorder prediction 176 192 - -
Pvu2g0555 263 Pfam C2 domain 11 101 IPR000008 -
Pvu2g0555 263 Gene3D C2 domain 9 128 IPR035892 -
Pvu2g0555 263 PRINTS Adhesive plaque protein signature 135 156 IPR002964 GO:0005576
Pvu2g0555 263 PRINTS Adhesive plaque protein signature 197 214 IPR002964 GO:0005576
Pvu2g0555 263 PRINTS Adhesive plaque protein signature 243 262 IPR002964 GO:0005576
Pvu2g0555 263 CDD C2 11 108 - -
Pvu2g0555 263 MobiDBLite consensus disorder prediction 145 175 - -
Pvu2g0555 263 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 127 IPR035892 -
Pvu2g0555 263 MobiDBLite consensus disorder prediction 135 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0555 Pvu-Chr2 4906063 4907978 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0555 - - vra:106777522 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0555 2 4906063 4907978 Pvu2g0555 2 4906063 4907978 ECH