Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0552 ATGGCGGCACAAGCAGAATGGATGTTCAGAGCGTTGAGGAGTGGTCGGCGGCAGATGTCGATGGCAAGGAAATGGGAGGAGAAATGGCTTACGCTGCCTCCGGTGGCGGCGAGTGGGAGTGTGGAGGTGAAGGGAAAGACGAAGGGAAAGGGAAACGAAGTCTCCTCCACTCCCACCACCGCCCTGAAATGGATTGTTCGGTGCTGCCCAAGCGCCCCCATATCCCTTCTGCACAAGCTTTTCCGTCTAAGACAGGTTCGAGTTCTCTCTCCTCCTCACACGGAAACACTGAAAAGGGTCGCAGCGAAGGACACCTTGAACTCTGGAGATCGCATTTTACTTCCTCAATCTGTTCAACAAAAACCAACGCCTACACGCAAACCTCATTCTTCTCTCACTCCCCAACAAATCAACTTCATCCGCACTCTTGTTATACACAAGGATCCTGCCATTCTCGTCCTCAACAAACCTCCAGGAATGCCTGTGCAGGGTGGCATTAATATCAAACACAGCTTAGATGTAGTAGCTGCTGCATGTTTAAATTATGAGTACTCTGAACCTCCTCGTCTGGTGCATAGACTAGACAGAGACTGTTCAGGCATTCTGGTGATGGGAAGAACACAGACAAGTACTACAGTCCTGCATTCCATCTTTCGCGAGAAAACATCTAGGGCATTAGATGATACTGAAGAAGAGAAGAGAATACTACAAAGAAGGTATTGGGCACTTGTCCTTGGACGTCCTAGATGTTCAAAGGGGTTGGTCACTGCTTCACTGGGTAAGGTGGTAGTTGACAATGGGAAATCTGATCGAATAACTGTAGTTGACAATTCTACATCATTGTCATCACAGCATGCCATTACAGAGTACCGAGTGATTGCATCATCATCACAAGGTTACACATGGTTGGAGTTGTCCCCTTTAACTGGTAGAAAACACCAGCTTCGAGTGCACTGTGCTGAGGTGTTAGGTACACCAATAGTTGGGGACTACAAGTATGGATGGCAAGCTCACAGGAAGTGGGGAAATTTTGATTTGTCTAATGTGGAGGATTCCTGTGAAGAGCATCTCAAGGAAGAAACACTCCCCTTTGGCCTTAATTTGAACAATGGGAGCATCTCCGAGAATCGTCCTCGTTTACATCTTCATTGCAAGAAAATAGTCTTACCCAATATATCTGAAGCACTGCAAAATGTGCAATCATTTTCCAATTGTGATCTTTCACAAGTGGAAGGGCTTCAGTTGGTCGCGGATTTGCCTCCATACATGCAAAGAAGTTGGGATATCACAAGTTATTGA 1299 0.4665 MAAQAEWMFRALRSGRRQMSMARKWEEKWLTLPPVAASGSVEVKGKTKGKGNEVSSTPTTALKWIVRCCPSAPISLLHKLFRLRQVRVLSPPHTETLKRVAAKDTLNSGDRILLPQSVQQKPTPTRKPHSSLTPQQINFIRTLVIHKDPAILVLNKPPGMPVQGGINIKHSLDVVAAACLNYEYSEPPRLVHRLDRDCSGILVMGRTQTSTTVLHSIFREKTSRALDDTEEEKRILQRRYWALVLGRPRCSKGLVTASLGKVVVDNGKSDRITVVDNSTSLSSQHAITEYRVIASSSQGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGNFDLSNVEDSCEEHLKEETLPFGLNLNNGSISENRPRLHLHCKKIVLPNISEALQNVQSFSNCDLSQVEGLQLVADLPPYMQRSWDITSY* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0552 432 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 28 430 - -
Pvu2g0552 432 CDD PseudoU_synth_RluA_like 151 342 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pvu2g0552 432 Pfam RNA pseudouridylate synthase 151 320 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pvu2g0552 432 Coils Coil 219 239 - -
Pvu2g0552 432 SUPERFAMILY Pseudouridine synthase 139 391 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Pvu2g0552 432 Gene3D Pseudouridine synthase 135 401 - -
Pvu2g0552 432 PANTHER RNA PSEUDOURIDINE SYNTHASE 3, MITOCHONDRIAL 28 430 - -
Pvu2g0552 432 MobiDBLite consensus disorder prediction 111 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0552 Pvu-Chr2 4883459 4887759 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0552 - - vun:114170473 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0552 2 4883459 4887759 Pvu2g0552 2 4883459 4887759 ECH