Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0546 ATGGAAGCTTCGGACTTGAAGATTAGGTTCGGAGAAGAAGGTGGGAAGCACTGGACTGATGCCCTTCCCATTGGCAATGGACGCCTCGGAGCCATGATCTGCGGCCACCTCCATTCCGAAACCATCCACCTCAACGAGGACACGCTCTGGACTGGTACACCCGCGGACTACACTAATTCCAAAGCTCCACAAGCCCTTTCTCGCGTTAGAAACCTCGTTAACCGTCAACAATATCCACAAGCCACTGCTGCTGCTTCTGCCTTAACAGGATCAAATCCATCCGAGGCCTACCAACTTCTCGGCGATATAAAATTGGACTTCGATTATTCACATCTCACCGGCGGCCAACAAAGTTACCAGAGGGAGCTGGACTTGGATACTGCTACTGTCAAAGTCAACTATTCCGTTGGAGATGTTCAGTTCAAAAGGGAGCATTTTGCCTCCTACCCAGATCAAGTCATTGTCACCAACATTTCCGCCACTCAAAATGCCAGACTTTCATTCACACTTTCTCTACAGAGCAAAATGATTAATCAAACCTACTTAAACGGCACCAATCAGATTATAATGAAGGGATCGTGTCCTGGTAAAAGGGTCTCACCTCAACTCCAACACAGCCCACAAGATACTCCGCAGGGAATTCAATTCTCGGCAATTCTTGATCTGAAGATTGGTGGTAAAAATGGCGTTGTCACTGTTTTGGACGACAACAAGTTGAAGGTTGAGGCTTCAGATTGGGCTGTTTTACTTCTCGTTGCTTCGTCTTCCTTCAGTGACCCATTCACACCACCTTCAGATTCTAAAAAGGATCCTACTTCTGCGTGTTTCAGTACATTAAGCTCAATAAGCAATGTATCATATTCTGACCTCTATGCACACCATTTAAAAGACTATCAAGATCTTTTTCACCGAGTATCGCTGAAGCTTATGAGAAGCACCCAGCTGAATATTTCAGAAGACAGCTCTTTGGAATTGAAGAAGCTTGTGCCAACGGTTGCTAATCTGTCTCTAGTGGACAGTGTAACACAAGTTTCAACCTCTGACAGAGTGAAATCATTTCAGACTGATGAAGATCCATCATTGGTGGAGCTTCTATTTCAATATGGTCGATATTTGCTTATTTCTTCTTCGCGCCCTGGAACTCAGGTGGCAAACCTACAGGGAATTTGGAACAAAGATCTTGAGCCTACTTGGGATGGAGCCCCCCACTTGAACATCAATCTTGAAATGAACTATTGGCCTGCTCTTCCTTGCAATCTTAGCGAGTGTCAAGAACCCTTGTTTGATTATCTTTCCTCTCTGTCTGTGAATGGCAGTAAAACTGCATATGTGAATTACCAAGCAAGTGGGTGGGTGGCACATAGTAAATCAGATATATGGGCTAGAACATCAGCAGGTCATGGTGATGTTCTGTGGGCCTTATGGCCAATGGGTGGAGCATGGCTTTGTACCCATCTATGGGAGCACTATGCTTACACGATGGATAAGGATTTCCTTGAATATAAAGCATATCCCATTATGGAAGGATGTGTCTCATTTCTGTTGAGCTGGCTGATAGAAGGCAATGAAGGATATCTAGAAACTAATCCATCAACTTCCCCTGAACATAATTTTATTGCTCCCAACGGTGAGCCTGCATGTGTAAGCCAGTCATCCACAATGGATGTGGCAATCATACATGAAGTCTTCTCCAAATTTCTTTCTGCTGCTGAGGTTATAGGGAGAACAAAGGATAATATTGTCAGAAAAGTTAGTGAAGCTCAACCACGGTTACGTCCACTCTATATTGCCCAAGATGGTTCCATTATGGAATGGGTGAAAGATTTCAAGGATCCAGAGGTACATCACCGGCACCTCTCACATCTATTCGGTCTATTTCCGGGTCATACAATCACTCTTGAGCAAACTCCAGCCCTGTTTGAAGCTGCTGAGAAAAGCCTTTATAAACGAGGAGAGGAAGGTCCTGGGTGGTCAACCACATGGAAAACTGCTTGCTGGGCACGTCTGCAGAACAGTTCGAATGCATATAAGATGATCAAGCGCTTGATAAACTTGGTGGATCCGGATCATGAGATACCATTTCAAGGTGGACTTTACAGCAACCTGTTTGCAGCACACCCACCATTTCAGATCGATGCCAACTTCGGTTTTGCAGCTGCAGTTGCAGAAATGTTTGTGCAGAGTACATTGAGCGATCTTTTCTTACTTCCTGCTCTTCCCTGGGAGAAATGGCCAAATGGGTCCTTGAAAGGCTTGAAGGCTCGTGGAGGAACAACAGTTAACATATGCTGGAGAGAAGGGGATCTTCAGGAGTTTGGTATATGGTCCGAGGAACAAACAAGAACAACTCTGACAAAAAGAATACACTATAAAGGAACCATGGTCACCACAGACTTAATCACTGGCATTTTCTACAAGTTCAACGGACAGTTGAAGTGTTTGAACTCATGCTCTCTTTCAGAAATGGCGTGTTCTTGA 2478 0.4467 MEASDLKIRFGEEGGKHWTDALPIGNGRLGAMICGHLHSETIHLNEDTLWTGTPADYTNSKAPQALSRVRNLVNRQQYPQATAAASALTGSNPSEAYQLLGDIKLDFDYSHLTGGQQSYQRELDLDTATVKVNYSVGDVQFKREHFASYPDQVIVTNISATQNARLSFTLSLQSKMINQTYLNGTNQIIMKGSCPGKRVSPQLQHSPQDTPQGIQFSAILDLKIGGKNGVVTVLDDNKLKVEASDWAVLLLVASSSFSDPFTPPSDSKKDPTSACFSTLSSISNVSYSDLYAHHLKDYQDLFHRVSLKLMRSTQLNISEDSSLELKKLVPTVANLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPTWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVSFLLSWLIEGNEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSKFLSAAEVIGRTKDNIVRKVSEAQPRLRPLYIAQDGSIMEWVKDFKDPEVHHRHLSHLFGLFPGHTITLEQTPALFEAAEKSLYKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMFVQSTLSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICWREGDLQEFGIWSEEQTRTTLTKRIHYKGTMVTTDLITGIFYKFNGQLKCLNSCSLSEMACS* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0546 825 SUPERFAMILY Six-hairpin glycosidases 269 773 IPR008928 GO:0005975
Pvu2g0546 825 Gene3D - 248 725 IPR012341 GO:0005975
Pvu2g0546 825 PIRSF UCP007663 2 806 IPR016518 GO:0004560
Pvu2g0546 825 PANTHER - 5 822 - -
Pvu2g0546 825 PANTHER ALPHA-L-FUCOSIDASE 2 5 822 - -
Pvu2g0546 825 Pfam Glycosyl hydrolase family 65, N-terminal domain 15 258 IPR027414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0546 Pvu-Chr2 4842975 4848948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0546 K15923 - gmx:100777878 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0546 2 4842975 4848948 Pvu2g0546 2 4842975 4848948 ECH
Pvu2g0546 2 4842975 4848948 Pvu7g0422 7 3323890 3330388 PCT