Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0541 AAATTTGTAGGAGACGCTCTTCATGCTTTCAGCAAAAAGCTTTCTGATCCCAACAACGCACTGAAGAGTTGGGACCCTTCTATTATCAATCCTTGTACTTGGCTTCATGTCACTTGCGACTCCAATCATAACGTCATTCGCCTAGACTTGGGCAATAATGATTTCACTGGAACTTTGGGTCCAGAACTTGCCCAACTTCCCTCCCTTCAATATCTGGATCTCAACGGAAATAAGTTAAGTGGAAATATTCCTGAAGAACTTGGTAACTTGGCAAACCTTATTAGTATGGATTTGTCTAATAATAAATTAGAAGGAAGTATTCCAAAATCTTTTGTCAAATTAACGTCTCTTAAATCCTTATGGCTAAACAACAATGAGTTGTCAGGAACAATCCCAAAAGCGCTCATTCTACTTAATCTCGATGAATTTTTTGATAATAAGAAACTCAGCGGCACAGGAGTGAAAGGAGTGGTTCCTTAG 480 0.3875 KFVGDALHAFSKKLSDPNNALKSWDPSIINPCTWLHVTCDSNHNVIRLDLGNNDFTGTLGPELAQLPSLQYLDLNGNKLSGNIPEELGNLANLISMDLSNNKLEGSIPKSFVKLTSLKSLWLNNNELSGTIPKALILLNLDEFFDNKKLSGTGVKGVVP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0541 159 Gene3D Ribonuclease Inhibitor 4 159 IPR032675 -
Pvu2g0541 159 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 2-LIKE 3 139 - -
Pvu2g0541 159 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 3 139 - -
Pvu2g0541 159 Pfam Leucine Rich repeats (2 copies) 44 83 IPR025875 -
Pvu2g0541 159 Pfam Leucine rich repeat 88 127 IPR001611 GO:0005515
Pvu2g0541 159 SMART LRR_typ_2 66 90 IPR003591 -
Pvu2g0541 159 SMART LRR_typ_2 114 138 IPR003591 -
Pvu2g0541 159 PRINTS Leucine-rich repeat signature 69 82 - -
Pvu2g0541 159 PRINTS Leucine-rich repeat signature 90 103 - -
Pvu2g0541 159 Pfam Leucine rich repeat N-terminal domain 4 40 IPR013210 -
Pvu2g0541 159 SUPERFAMILY L domain-like 6 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0541 Pvu-Chr2 4808059 4809863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0541 4 152 Receptor kinase-like Gene Family AT1G34210 51.656 5.29e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0541 - - pvu:PHAVU_002G052500g 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0541 2 4808059 4809863 Pvu2g0541 2 4808059 4809863 ECH
Pvu2g0541 2 4808059 4809863 Pvu7g0444 7 3471747 3474565 PCT