Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0539 ATGGCTTCGTCTTCTTCTGCGCCGGGAGGTTTAGGGTTATCGGAAGAAGATTACGAGGTGATGTATGGCTCTGAATCGGGATGGGTGGAGGCTCGATCATCCTGCGATCATCTACCTTCTTTATCCGCCGATCTCAGCCACATTCCGCCGCCCAACACACCGTGCCACACCTGCCACCACCCCTCCGAAAACTGGCTCTGCCTCTCTTGCAAGCAGGTCCTCTGTAGCCGTTTCGTGAACAAGCACATGCTCCATCACTTCACCCACACTAATCACTTTCTCGCCCTCAGTTTCAGTGATCTCTCCGTCTGGTGTTTCTCTTGCGACGCTTATTTGGATGCTCAACTCATTCCCCAACTTCGTCCTGTTCATCAACTAGCTTATATAATGAAATTCGGTGAGCCTCCACCACTTATTCAACATCAACCTTCTTCCTCTGCCACTTCGGACTAG 453 0.5121 MASSSSAPGGLGLSEEDYEVMYGSESGWVEARSSCDHLPSLSADLSHIPPPNTPCHTCHHPSENWLCLSCKQVLCSRFVNKHMLHHFTHTNHFLALSFSDLSVWCFSCDAYLDAQLIPQLRPVHQLAYIMKFGEPPPLIQHQPSSSATSD* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0539 150 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 135 IPR013083 -
Pvu2g0539 150 SUPERFAMILY RING/U-box 33 123 - -
Pvu2g0539 150 PANTHER HISTONE DEACETYLASE-LIKE PROTEIN 3 138 - -
Pvu2g0539 150 ProSiteProfiles Zinc finger UBP-type profile. 33 134 IPR001607 GO:0008270
Pvu2g0539 150 Pfam Zn-finger in ubiquitin-hydrolases and other protein 55 113 IPR001607 GO:0008270
Pvu2g0539 150 SMART Zf_UBP_1 54 103 IPR001607 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0539 - - var:108319921 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0539 2 4803321 4804204 Pvu2g0539 2 4803321 4804204 ECH