Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0532 ATGGAGGGAGCGAATGGTGGCGGCGATGGCGATGGTGGCGATCGTCCATGGCAATCTTACCACACTGTTTACACAACCGCTAAAGCAGGAATGGAAGGAGTGGACAAGGAGAAAGTGCAGAAAGTAGTTTACGAAATGAGTAAAGGATCCAAATATTTTCAAAACGAGGAACGCAAGGAAGCTTTTATTAACCAGAAAGTTCAGAACCTGCGAATTCAGTGTGCTAAGCTCACAGAAGCAGACCTGGTCCACTATCGCAAGGTGGCGGATAGAAGAATTGTTGAGCTAGAAGCTTCGCGTGACCTTTCGAGGATTTGGTTACATGTAGATATGGATGCTTTCTATGCTGCAGTTGAGACTTTAAGTAACCCTACATTACAGGGCAAGCCAATGGCTGTTGGGAGCATGTCCATGATATCCACTGCCAACTATGAGGCCCGAAAATTTGGGGTTCGTGCTGCCATGCCTGGGTTCATTGCACGTAAGCTATGTCCAGAATTAATCTTTGTCCCAATAGATTTCAAGAAGTATACTTATTATAGTGATTTGACTAGAAAAGTTTTCCGGATATACGATCCCAATTTCATTGCTGGTAGCCTGGACGAAGCATACCTTGATATAACTGAAGTTTGCAAAGAAAGGAATGTCAATAGTGAAGAAATTGCCCAAGAACTCAGAGCTGGTGTTTATGAAGAGACTGGTCTCACATGTAGTGCTGGAGTGGCACCAAATCGCTTACTTGCTAAGGTTTGTTCAGACATAAACAAGCCAAATGGACAGTATATTTTGCCAAATGACCGCATGGCTGTTATGACCTTTGTATCCTCCCTTCCTATCAGAAAGATTGGGGGCATTGGTAAGGTCACAGAACATATTTTAAAGGGAGTTTTTGAAATTAACACATGTGAGCAGATGCTGGAGAAGAGTAGCTACCTTTATGCAATTCTCTCTCAGCCAACAGCAGAATTTTTTTGCTCTGTAGGCTTAGGTCTTGGGCAGAAAGATTCTCCCCAAGTGAGATTTCGGAAAAGTATTAGTAATGAAAGAACATTTTCTGCCACTGAAGATGAGGTGCTATTGCATAAAAAATTGGTGGAGCTTGCTGAAATGCTATCGGTCGACATGCAGAAAGAGGGTCTGTGTGGGCGAACATTGACTCTTAAGCTGAAAACTGCTTCTTTTGAGGTTCGGACCAGAGCTGTGACTTTACAAAAGTACATCAGCTCGAGTGAGGATATCTTGAAGCATGCTAAGAAGTTGCTAAAAGCTGAACTTCCTATTTCAGTAAGATTGATAGGCCTTAGAGTATCTCAGTTTAATGGAGACAAATGTAGTGCTGCGCCTGACCCTACACAGAAGACCATTACCAACTTCATTACTTCAGGAGATGTCAATAGAAATTGTAGTTCTTTTCCAGATGTTGCAGATCTGGACTTTGTCAGTGATGCAGAAACCAATCTTTCCATTGACAATCGGCAGACAAGTCAACTTGATTGGAGAGATCCTTTTGTTGGTAACTATTTGTCTGATGGAGATCACCAAAGCTGTATTGTCCAGAAAAATGGTGTAGAAGAGGTACAAACACCTAGTAATGATGCTACAAGTTCTCACCACAGTGGATTTACAGAAGGATCTACTTCTTTCCAGGGGCAGTTCGAAGGCATAAATGTGATGAATGAGTCTAAGCTACGGGAGGGTGCGAGACTTAATTCTTGTTGTCAGGAGACGACAATGTTGTGGTTGAATGACTACAAATGTTCACTTTGTGGAATAGAACTACCTCCAAGTTTTGTTGAGGAAAGATTGGAACACTCTGATTTTCATCTTGCTGAAAAGCTTCAAAAGGAAGAATCTAGGATTCACCAACCATATGTTCCGAGTCGAAGTAGGAATCAAAAGGATGGAATCACTAGACAAAGCAAATCTAAGAAGCAAAAGTTGTCCAACAAAGAAGGCAAATATACACCCATTGATTCTTTTTTTGTTAAAAAGTAA 1995 0.416 MEGANGGGDGDGGDRPWQSYHTVYTTAKAGMEGVDKEKVQKVVYEMSKGSKYFQNEERKEAFINQKVQNLRIQCAKLTEADLVHYRKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLQGKPMAVGSMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPIDFKKYTYYSDLTRKVFRIYDPNFIAGSLDEAYLDITEVCKERNVNSEEIAQELRAGVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYILPNDRMAVMTFVSSLPIRKIGGIGKVTEHILKGVFEINTCEQMLEKSSYLYAILSQPTAEFFCSVGLGLGQKDSPQVRFRKSISNERTFSATEDEVLLHKKLVELAEMLSVDMQKEGLCGRTLTLKLKTASFEVRTRAVTLQKYISSSEDILKHAKKLLKAELPISVRLIGLRVSQFNGDKCSAAPDPTQKTITNFITSGDVNRNCSSFPDVADLDFVSDAETNLSIDNRQTSQLDWRDPFVGNYLSDGDHQSCIVQKNGVEEVQTPSNDATSSHHSGFTEGSTSFQGQFEGINVMNESKLREGARLNSCCQETTMLWLNDYKCSLCGIELPPSFVEERLEHSDFHLAEKLQKEESRIHQPYVPSRSRNQKDGITRQSKSKKQKLSNKEGKYTPIDSFFVKK* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0532 664 Pfam Ubiquitin-Binding Zinc Finger 583 616 IPR041298 -
Pvu2g0532 664 Gene3D - 111 261 IPR043128 -
Pvu2g0532 664 Gene3D - 340 445 IPR036775 GO:0003684|GO:0006281
Pvu2g0532 664 PIRSF DNA_pol_eta 218 311 - -
Pvu2g0532 664 PIRSF DNA_pol_eta 98 220 - -
Pvu2g0532 664 PIRSF DNA_pol_eta 513 664 - -
Pvu2g0532 664 Gene3D - 24 110 - -
Pvu2g0532 664 CDD PolY_Pol_IV_kappa 107 439 IPR022880 GO:0003887
Pvu2g0532 664 MobiDBLite consensus disorder prediction 634 651 - -
Pvu2g0532 664 Pfam impB/mucB/samB family 109 253 IPR001126 GO:0006281
Pvu2g0532 664 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 340 437 IPR036775 GO:0003684|GO:0006281
Pvu2g0532 664 SUPERFAMILY DNA/RNA polymerases 81 332 IPR043502 -
Pvu2g0532 664 MobiDBLite consensus disorder prediction 615 664 - -
Pvu2g0532 664 Gene3D - 262 335 - -
Pvu2g0532 664 Hamap DNA polymerase IV [dinB]. 103 455 IPR022880 GO:0003887
Pvu2g0532 664 ProSiteProfiles Zinc finger UBZ3-type profile. 579 616 IPR041298 -
Pvu2g0532 664 PANTHER DNA POLYMERASE KAPPA 14 643 - -
Pvu2g0532 664 PANTHER DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER 14 643 - -
Pvu2g0532 664 Pfam impB/mucB/samB family C-terminal domain 342 442 IPR017961 GO:0003684|GO:0006281
Pvu2g0532 664 Gene3D - 123 171 - -
Pvu2g0532 664 ProSiteProfiles UmuC domain profile. 106 286 IPR001126 GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0532 Pvu-Chr2 4764935 4769697 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0532 K03511 - gmx:100816973 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0532 2 4764935 4769697 Pvu2g0532 2 4764935 4769697 ECH