Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0405 CTGGTTTGGACTGCACAGACCATTGCTCCAGACAGTGATGGTGCTATTGATGGCCACCTTCGTGAAGTTGGACTCACGTTTCACCTCCTTAAGGATGTTCCTGGGATTGTCTCAAAGAACATTGGAAAGGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTCTGGATTGCACACCCTGGTGGACCTGCAATTCTGGACCAAGTTGAGCAAAAGTTGGGTCTGAAACCTGAAAAGATGAAGGCCACTAGAGATGTGCTTAGTGATTATGGGAACATGTCAAGTGCATGTGTGCTTTTCATCTTGGATGAGATGAGGAGGAAATCAGTTGAAAATGGACTTAAAACAACAGGTGAAGGACTTGAATGGGGTGTTTTGTTTGGTTTTGGACCTGGTCTTACCATCGAGACTGTTGTTCTCCACAGTGTTGCAGTCTAA 456 0.4496 LVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0405 151 PANTHER CHALCONE SYNTHASE 7 1 150 - -
Pvu2g0405 151 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 150 IPR011141 GO:0009058|GO:0016747
Pvu2g0405 151 SUPERFAMILY Thiolase-like 1 148 IPR016039 GO:0016746
Pvu2g0405 151 Pfam Chalcone and stilbene synthases, C-terminal domain 1 149 IPR012328 -
Pvu2g0405 151 Gene3D - 1 151 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0405 Pvu-Chr2 3771797 3772252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0405 65 150 Acyl Lipid Metabolism Gene Families AT1G71160 32.558 3.77e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0405 K00660 - pvu:PHAVU_002G0390001 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0405 2 3771797 3772252 Pvu2g0405 2 3771797 3772252 ECH