Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0404 ATGGTGAGTGTATCCGAGATCCGCCAGGCTCAAAGGGCAGAAGGCCCAGCAAACATCCTTGCCATTGGAACTGCAACCCCATCAAACTGTGACAAGTCGATGATAAAGAAGAGATATATGCACCTCAACGAGGAGATACTGAAGGAGAATCCTAACATGTGTGCTTACATGGCACCTTCTTTGGATGCGAGACAAGACATAGTGGTGGTAGAGGTACCAAAGTTAGGGAAAGAGGCTGCAGTGAAGGCCATAAAGGAGTGGGGACAGCCAAAGTCAAAGATTACACACTTGATATTTTGCACCACTAGTGGCGTGGACATGCCTGGTGCTGATTACCAGCTCACCAAACTCTTGGGACTTCGGCCCTATGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGAGGCACG 417 0.4892 MVSVSEIRQAQRAEGPANILAIGTATPSNCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0404 139 PANTHER CHALCONE SYNTHASE 7 2 30 - -
Pvu2g0404 139 PANTHER CHALCONE SYNTHASE 7 30 139 - -
Pvu2g0404 139 Gene3D - 1 139 IPR016039 GO:0016746
Pvu2g0404 139 SUPERFAMILY Thiolase-like 1 138 IPR016039 GO:0016746
Pvu2g0404 139 Pfam Chalcone and stilbene synthases, N-terminal domain 30 139 IPR001099 -
Pvu2g0404 139 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 30 IPR011141 GO:0009058|GO:0016747
Pvu2g0404 139 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 30 139 IPR011141 GO:0009058|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0404 Pvu-Chr2 3770982 3771589 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0404 K00660 - pvu:PHAVU_002G0392001 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0404 2 3770982 3771589 Pvu2g0404 2 3770982 3771589 ECH