Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0402 ATGGTGAGTGTATCCGAGATCCGCCAGGCTCAAAGGGCAGAAGGCCCAGCAACCATCCTTGCCATTGGAACTGCAACCCCATCTAACTGTGTTGATCAGAGCACATATCCCGATTACTACTTCAGAATCACAAACAGTGAGCACATGACCGACCTCAAAGAGAAGTTCCAGCGCATGTGTGATAAGTCGATGATAAAGAAGAGATATATGCACCTGAACGAGGAGATACTGAAGGAGAATCCTAACATGTGTGCTTACATGGCACCTTCTTTGGATGCGAGGCAAGACATAGTGGTGGTAGAGGTACCAAAGCTAGGGAAAGAAGCTGCAGTCAAGGCCATAAAGGAGTGGGGACAGCCAAAGTCAAAGATTACACACTTGATATTTTGCACCACCAGTGGTGTGGACATGCCTGGTGCTGATTACCAGCTCACCAAACTCTTGGGACTTCGGCCCTATGTGAAGAGGTACATGATGTACCAACAAGGATGCTTTGCAGGAGGCACGGTTCTTCGAATGGCCAAGGATTTGGCTGAGAACAACAAGGGTGCCCGTGTGCTTGTGGTGTGTTCTGAGATCACTGCAGTGACTTTCCGTGGGCCAAGTGACACCCACCTAGACA 622 0.492 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0402 207 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Pvu2g0402 207 CDD CHS_like 16 205 - -
Pvu2g0402 207 PANTHER CHALCONE SYNTHASE 3 2 207 - -
Pvu2g0402 207 Pfam Chalcone and stilbene synthases, N-terminal domain 5 207 IPR001099 -
Pvu2g0402 207 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 207 IPR011141 GO:0009058|GO:0016747
Pvu2g0402 207 Gene3D - 1 207 IPR016039 GO:0016746
Pvu2g0402 207 SUPERFAMILY Thiolase-like 1 205 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0402 Pvu-Chr2 3757437 3758400 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0402 K00660 - gmx:100170701 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0402 2 3757437 3758400 Pvu2g0402 2 3757437 3758400 ECH