Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0399 TGCTTTGCAGGAGGCACGGTTCTTCGATTGGCCAAGGATTTGGCTGAGAACAACAAGGGTGCCCGTGTGCTTGTGGTGTGTTCTGAGATCACTGCAGTCACCTTCCGTGGGCCAAGTGACACCCACCTAGACAGTCTTGTGGGACAGGCATTGTTTGGAGATGGAGCAGCTGCAGTGATTGTTGGTTCTGATCCTGTTCCACAGATTGAGAAGCCTTTGTTTGAGTTGGTTTGGACTGCACAGACCATTGCTCCAGACAGTGATGGTGCTATTGATGGCCACCTTCGTGAAGTTGGACTCACGTTTCACCTCCTTAAGGATGTTCCTGGGATTGTCTCAAAGAACATTGGAAAGGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTCTGGATTGCACACCCTGGTGGACCTGCAATTCTGGACCAAGTTGAGCAAAAGTTGGATCTGAAACCTGAAAAGATGAAGGCCACTAGAGATGTGCTGAGTGATTATGGGAACATGTCAAGTGCATGTGTGCTATTCATCTTGGATGAAATGAGGAGGAAATCAGCTGAAAATGGACTTAAAACGACAGGTGAAGGACTTGAATGGGGTGTCTTGTTTGGTTTTGGACCTGGACTTACCATTGAGACTGTTGTTCTCCACAGTGTCTCAATATAA 681 0.4699 CFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPVPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLDLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVSI* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0399 226 Pfam Chalcone and stilbene synthases, N-terminal domain 1 65 IPR001099 -
Pvu2g0399 226 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 225 IPR011141 GO:0009058|GO:0016747
Pvu2g0399 226 Pfam Chalcone and stilbene synthases, C-terminal domain 75 224 IPR012328 -
Pvu2g0399 226 Gene3D - 1 72 IPR016039 GO:0016746
Pvu2g0399 226 Gene3D - 73 226 IPR016039 GO:0016746
Pvu2g0399 226 SUPERFAMILY Thiolase-like 1 70 IPR016039 GO:0016746
Pvu2g0399 226 SUPERFAMILY Thiolase-like 72 223 IPR016039 GO:0016746
Pvu2g0399 226 CDD CHS_like 1 221 - -
Pvu2g0399 226 PANTHER CHALCONE SYNTHASE 7 1 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0399 Pvu-Chr2 3748310 3748992 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0399 1 220 Miscellaneous Gene Families AT3G52160 29.956 6.21e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0399 K00660 - gmx:100782897 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0399 2 3748310 3748992 Pvu2g0399 2 3748310 3748992 ECH