Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0397 ATTGAGAAGCCTTTGTTTGAGTTGGTTTGGACTGCACAGACCATTGCTCCAGACAGTGATGGTGCTATTGATGGCCACCTTCGTGAAGTTGGACTCACGTTTCACCTCCTTAAGGATGTTCCTGGGATTGTCTCAAAGAACATTGGAAAGGCACTTTTTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTCTGGATCGCACACCCTGGTGGACCTGCAATTTTGGACCAAGTTGAGCAAAAGTTGGGTCTGAAACCTGAAAAGATGAAGGCCACAAGAGATGTGCTGAGTGATTATGGGAACATGTCAAGTGCATGTGTGCTATTCATCTTGGATGAGATGAGGAGGAAATCAGCTGAAAAGGGACTTAAAACAACAGGTGAAGGACTTGAATGGGGTGTTTTGTTTGGTTTTGGACCCGGACTTACCATCGAAACAGTCGTTCTCCATAGTGTCGCAATATAA 477 0.4486 IEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSAEKGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0397 158 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 1 157 IPR011141 GO:0009058|GO:0016747
Pvu2g0397 158 Gene3D - 5 158 IPR016039 GO:0016746
Pvu2g0397 158 PANTHER CHALCONE SYNTHASE 7 1 157 - -
Pvu2g0397 158 Pfam Chalcone and stilbene synthases, C-terminal domain 7 156 IPR012328 -
Pvu2g0397 158 SUPERFAMILY Thiolase-like 4 155 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0397 Pvu-Chr2 3739327 3739803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0397 69 143 Miscellaneous Gene Families AT4G34520 32.895 2.28e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0397 K00660 - pvu:PHAVU_002G0390001 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0397 2 3739327 3739803 Pvu2g0397 2 3739327 3739803 ECH