Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0346 ATGGTTAAGAAGACGGTGTTGAAGGTTGACATCACTTGTGTCAAATGCAAAAGGAAACTCCTCAAGACTGTGTCTTCCCTTCAAGGGGTGGATAAAATTGAAGCTGATGAAGGGAAGGGTACGTTGACCGTGACAGGGGATGCAGACCCATATGACATAATAGTTCGCATTAGGAAAGCTGGGAAACATGCTGAAGTTGTGAGTGTTGGGCCTCCCCCGGCCCCTCCGAAACAGGACCAGAAGAAGCCCGAAGAAAAAAAGCCCGATGAAAAGAAGAAGCCCGACCCAGTGAAGCAGGAGCAAAAACCGAATGAGCCCTACATGCAGATGCCATATTACTACCCGCCACACCAACCGGTAGTGGTATACATGAACAGATACGAGGAGCCCAATCCATCTTGCACTATATTGTAA 414 0.4807 MVKKTVLKVDITCVKCKRKLLKTVSSLQGVDKIEADEGKGTLTVTGDADPYDIIVRIRKAGKHAEVVSVGPPPAPPKQDQKKPEEKKPDEKKKPDPVKQEQKPNEPYMQMPYYYPPHQPVVVYMNRYEEPNPSCTIL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0346 137 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Pvu2g0346 137 Gene3D - 1 72 - -
Pvu2g0346 137 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
Pvu2g0346 137 PANTHER OS04G0661100 PROTEIN 2 136 - -
Pvu2g0346 137 MobiDBLite consensus disorder prediction 78 100 - -
Pvu2g0346 137 CDD HMA 6 65 IPR006121 GO:0046872
Pvu2g0346 137 ProSiteProfiles Heavy-metal-associated domain profile. 11 66 IPR006121 GO:0046872
Pvu2g0346 137 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 136 - -
Pvu2g0346 137 MobiDBLite consensus disorder prediction 63 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0346 Pvu-Chr2 3406547 3407518 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0346 - - pvu:PHAVU_002G033800g 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0346 2 3406547 3407518 Pvu2g0346 2 3406547 3407518 ECH