Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0343 ATGAAGCATTTTGTCTTGGTCTTTCTTTTGGCCATTCTGGCCCCTCAGGAGTGTTTCCATGCCACAGTGGAAGCAAGGGATGGTTTCGTCAGAACCAGAGGCATCCACTTCATGCTGAACGGATACCCTTACTATGTAAACGGCTTCAACGCCTACTGGTTAATGTACACAGCTTCTGATCCATCTCAGAGGTTCAAGGTTTCCAATGCCTTCCGAGAAGCAGCAAGTCACGGCCTTACCGTTGCTAGAACTTGGGCCTTCAGTGATGGTGGTTATAGACCCCTACAGTATTCCCCTGGCTTCTACAATGACCAAATGTTCATGGGGTTGGACTTCGTTATATCTGAGGCCAGAAAGTACGGAATTAAGCTCATACTGAGCTTGGTGAACAACTATGAAAATTTTGGAGGCAAGAAGCAGTATGTGAACTGGGCTAGAAGTCAAGGGCAGTACCTTACTTCAGATGATGATTTCTTCAGGAGCCCTGTTGTTAAGGGCTACTACATGAACCATGTCAGGACTGTTCTTAACAGATACAACAGATTTACTGGCACCCGTTACAAAGATGACCCAACCATCATGGCGTGGGAGCTTATGAACGAGCCTAGGTGCACATCGGATCCTTCAGGAAGGACTATTCAGGCGTGGATCACGGAAATGGCTTGGTTTGTGAAGTCGATAGACAGGAACCACTTATTGGAGGCAGGTTTGGAAGGGTTTTACGGTCAATCAACACCAAAGAGAAAAAGATTGAATCCCGGTTTCGACATAGGCACAGACTTCATTGCAAATAACCGAATCTCAGACATAGATTTTGCAACTGTCCACTGTTACCCCGACCAATGGGTATCCAGCTCCAACGACCAGTATCAGCTTTCGTTCTTGAACAGCTGGCTCAGTGCTCACTTCATGGACGCGCAATACGCTATAAGGAAACCGGTTCTGGTGGCGGAATTTGGGAAATCGTTGAAGGGTTCGGCATACGAGAGGGATGAAGTGTTCAATGCTGTGTATTACAGAATATACGCTTCGGCTAAGAGAGGAGGAGCAGCAGGGGGAGCGTTGTTCTGGCAGCTTCTGACGGGGGGAATGGAATCTTTTCAAGACGGGTATGGAATCATGCTTGGCCAGAGTTCCTCTACGGCCGATCTCATTGCGCGCCAATCTCGGAAGCTGTTTCTGATTCGGAAGATCTTTGCGAGGGTGGCGAACATGCGGCGATGGCGAAGATCCAGAGGCAGCAGAGGATTTTCTGGCTCTGGAGGTGGAAACGGAGGTGGCCACGTTGGCAACTGA 1296 0.4861 MKHFVLVFLLAILAPQECFHATVEARDGFVRTRGIHFMLNGYPYYVNGFNAYWLMYTASDPSQRFKVSNAFREAASHGLTVARTWAFSDGGYRPLQYSPGFYNDQMFMGLDFVISEARKYGIKLILSLVNNYENFGGKKQYVNWARSQGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNRFTGTRYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMAWFVKSIDRNHLLEAGLEGFYGQSTPKRKRLNPGFDIGTDFIANNRISDIDFATVHCYPDQWVSSSNDQYQLSFLNSWLSAHFMDAQYAIRKPVLVAEFGKSLKGSAYERDEVFNAVYYRIYASAKRGGAAGGALFWQLLTGGMESFQDGYGIMLGQSSSTADLIARQSRKLFLIRKIFARVANMRRWRRSRGSRGFSGSGGGNGGGHVGN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0343 431 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 414 - -
Pvu2g0343 431 SUPERFAMILY (Trans)glycosidases 29 383 IPR017853 -
Pvu2g0343 431 PANTHER - 1 414 IPR045053 GO:0004553
Pvu2g0343 431 Pfam Cellulase (glycosyl hydrolase family 5) 46 329 IPR001547 GO:0004553|GO:0071704
Pvu2g0343 431 Gene3D Glycosidases 25 395 - -
Pvu2g0343 431 MobiDBLite consensus disorder prediction 412 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0343 Pvu-Chr2 3391469 3393850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0343 1 413 Glycoside Hydrolase AT5G66460 65.789 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0343 K19355 - gmx:100792073 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0343 2 3391469 3393850 Pvu2g0343 2 3391469 3393850 ECH