Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0333 ATGGCGCATTCTCGGCAACTCAACACCAAGATCAACAACAATGCCACCTTCTCCTCCAGTAACAACCTATACGACGACGTTTACGGTGGTCCTCCGAAGTTCGGCGTTTCAACCCTCTCCCCTCGTTTCGAAGATTACGCTGAGATTTTCGGAAGCTTCCACACCGGACGATCCTCCTCCATTCCGCTCCTCGATCTTCCCGCCGTCCACGACGCCGAGGCATTCTTCGATCCCCGAAGCCACTCTTTCAACTACACCGAAGTTTTCGGAGCCTTGGATTTTGAGCTTCCGTCCGACAACTTGTTTCACTGCCACACTGCTCTCGACGCTGCCTCCTCCGAAGAAGCCTGGAGTCCTGCAGAAACTGATTCATTTTCTGAAGAGTTTGATCAATCTATAATTAACCAAAGCATTTTGAATGGAGATCTTTTCCACTCTGTTGATGGTAATGTGGGATCGAACATTTTGTATCATAATAAGGTCAATGGTACAAGCAATGAACATATGTCAAAGGGGAAAACTCACTTGAGTCAGCAGCATGCTGTACCTGGTTTGGGACGAGTATACGATGAAACTACACAATTGCATCGAACTGATCCATCCTGTCAGGTTGCTGATGATATTGATCTTGATATAGAATTTCGTGCGGAGAAAGTGAAGGGAAACCACCCAAGGGCAATGGCACATCTCCGCAATTTTACCTCTGGGGAACAGATTTTTGACAGTGATCTAAATCTTCAAAATGGAGGAAGCAAAAAGGATTCTCATTCAGGTGAGATGTTCATAACTGTGTCTGACATCAACCTACGAAGTATGCCCTCTCAAGTGCCTCCCCCATCTCGCCCACCTCCTGTGCTGGATGTAAAAAAGGAGGACATGTGGGAATTTCATTCAAACAGCAGGCCGGTTGCTTCTGAAGAGACACTTGGTGCTGGTTCACCACCTTTCTTTGATGCGGAGGATCATATGAATTTGTCTGCTACCGCCTCTGCTGATGCTATGAAAGAAGCAATGCTTAGAGTAGAAGCAAAACTTAGGAGTACCAAAGAATTAAAAGGGAGAAAGAAATGGGATTGTGAAACCTATTTAAAGTCTAGTTATGATGCAAAAGTTAATGAAGCAAAGACGTGTAAGGATATCACTAGATTAAGTAGCTTGAATGATGAGACAACGCTGGGAAGTTATGACTGGAGACATTCAAAAGAAAAATTGTATGTCACAGATGACAGGCAGGAACTTAAGAAAGCTTCCCCAGAAACTATGGACAATTTAGAAGGGAAAAGAACTGCAAACATGTTTGAGGAAAAGAACAAGATGGAGTCCAGGTCATCTCAAGAATCCGATAGAAGTACTGAAGTTGGAACATGGAAAGACGAATCTGAATTTTTTGAATTGGTGGGAATGGGAGAATCTGGAATGGTAACTCAACCCACAAAGCAGACTAAGAATTTGATGCAAGGTACTGGAACCCAAAAACATGGTCAGAAGGAAAGAGAAGCATCCAATGTGCAAGAAAAGCATAAACAAGTAAAAGCAACCGAAGAAAATTATCAGGTGGAGGAGTACGAAATAAAATATACAGCAACAAAAGAGGCTTGTGAGCATGATGAAAACATTATGAAATGTGAAGCATCTAATAGACAAACAGCCAATGACGTTCAGCTGGCAACGGGGCTTAGGGAAAATCAGAAGAAACTAAGGGAGGTTGAAAAGCAACAACAGAACGTGAATAGGCAGCACCAATCTGGAAAAATCGAGGAAAATAGAAAAACACAACGAGAAGCTTTTGCTATAGGACAAACTGAGCACGAGGAAAAACTGAAAGGTTCTTGGAAGCTGGAAAATATTGACGAAAGATCAAATGTCGCTCTTGAATCGGATTCCAGTGAGGAAAAAGAGGTCTGTAAAAGTGAAAATGAAATGAAATTAAAACTAGGTAAACGGATTCAGATGAATAAGGGACTGGACGAAGCTCATGAAATAGTAGAAATTGAGAAAAGCCTCAAAAGTTCTTTGGACAATGAAGAAAGTGATGGAGCTGTAATACCTGCTTTCAGGTGGGATGAGAATGGAAAACAGCTCAAGGAACACATTGAACTGGAAGCAAATGAGATAAGACTGAAAGAGGCTTCTGAGCAGAGGGAAAACAAGGCATATGGAAAAGATCAAAGTACAAAGAAATTTGAAGATGTTTATGATGGGCACGGAGAAGGAAATAGACTTCAAGAATCAGGAGATGACAAAGGGATTCAGAAAGTTATGAATCAAACTCCAGTGCAAGAACAAATTAATAGGATTCTGAATGAGGCTCAAAAGAAAAAAGTCACTGAGAGCACATCAAGCCAAACATTTTGCATGGAAGGAAGTGTACCAGTATCAAATGAGAATAGTCACCTGGAGCAATCTGAGAATATGGACAAAGATGTTGGTGGAATGGAAAAAGTTAAGGGACCGAACAAGGCTTTGGATGGCAAGGAGAGGAAAGACGTGGGAAACATGAAGAATGCTAAAGCACCTGATGAGACATGGGAAATAGAGTGTGACGAAGATCTAGCAAATCAGTCAGCTTCCATGCATGAAGAATTTATTAGGAAACTGAAGGTATCTAAAGAATCTGTTGCTGACCAAACTATTGCAAAGATGAGAGCTGAATGCAAAGTTGGAGAAAGGCAATTGAAAGAGGTAGGGGTGGAAAATCAACTGGATAACAAAAAATTCAGAGCACCTAAACAAATGACTGCAGGAGATGCAGAGCATTCAGGAACCCAGTCAGAAAAGGAGGAAGACACAATGACAAAGGTCGATTACAGGAGTACAGAAGCAGCTGCTGAAACTGTTGTTCAGGAGACTGTAAATGCTCAGAAAACCGCTCGGTGGTTTCATATTAGTCAATCCACAGAAAGCAAAACTAAGAGTATTAATGAAACTTCTGCAATAATGAAAGATACTGAAAGGATGAGAAGAGAAAGAGAGTCAGAAAAGGATCATCTTAGAAAGATGGAAGAGGATGGGGATAGACAAACAGAACGTGAAAAAGAAGTTGAGAAAGCAATGCTGGAGGCTGAGAGGGAAAGGGAAAGGGAAAAGGATAGGATGGCTGTTGATAGAGCAACTTTGGAGGCTCGGGATAAGGCATATGCTGAAGCTTCTGAAAGGGAAGAAAGGGCTGCATTTGAAAGAGGAACTATGGAAGCACGGTACAAAGCACTGGCTGAGGCCAGGGAAAGACTTGAGAAGGCATGTGCAGAGGCCAGGGACAAGTCATACATTGATAAAGAAACTACAGATGCAAGATTGAAAGCAGAACGTGCTGCTGTAGAAAGAGCAACTGCAGAGGCTCAAGACCGAGCCATGGAAAAATTAAAGAATGAAAGGACTGCGTTTGAATCAAGAGAACGGTTAGAGAGATCTGTATCTGACAATTTTTGTGAAAGACAAGACTCTTTGTCCTCGGATATGCCGGATCCACAGTTTCAGAACTCTAGCTCCTCCACAGGTTCCAGACAACCATATTCACTTTATGGTGCTGCCTCTTTTTCTGAGAGATCAGAAAGAGAAGGTGAATCAGCTCAGAGGTGTAGAGCTAGACTGGAGAGGCATCGCCGAACAGCTGAGCGTGCAGCAAAAGCTTTGGCAGAAAAGAACATGCGTGACCTTCTAGCACAGAAGGAGCAAGCAGAGAAAAATAGACTATCAGAAACTCTGGATGCTGAAGTAAGGAGGTGGTCAGGTGGAAAAGAAGGAAACTTGCGTGCCTTACTTTCTACACTGCAATATATCCTTGGGCCTGATTCTGGGTGGCAATCAATCCCATTGACGGAGGTCATTACTTCTGCTGCTGTGAAGAAAGCTTACAGGAAGGCCACCCTGTGTGTTCATCCTGACAAATTACAGCAACGTGGAGCAAGTATTCAACACAAATACATATGCGAGAAGGTTTTTGATCTTTTGAAGGAAGCTTGGAACAAATTCAACTCCGAGGAGAGGTAA 3990 0.4261 MAHSRQLNTKINNNATFSSSNNLYDDVYGGPPKFGVSTLSPRFEDYAEIFGSFHTGRSSSIPLLDLPAVHDAEAFFDPRSHSFNYTEVFGALDFELPSDNLFHCHTALDAASSEEAWSPAETDSFSEEFDQSIINQSILNGDLFHSVDGNVGSNILYHNKVNGTSNEHMSKGKTHLSQQHAVPGLGRVYDETTQLHRTDPSCQVADDIDLDIEFRAEKVKGNHPRAMAHLRNFTSGEQIFDSDLNLQNGGSKKDSHSGEMFITVSDINLRSMPSQVPPPSRPPPVLDVKKEDMWEFHSNSRPVASEETLGAGSPPFFDAEDHMNLSATASADAMKEAMLRVEAKLRSTKELKGRKKWDCETYLKSSYDAKVNEAKTCKDITRLSSLNDETTLGSYDWRHSKEKLYVTDDRQELKKASPETMDNLEGKRTANMFEEKNKMESRSSQESDRSTEVGTWKDESEFFELVGMGESGMVTQPTKQTKNLMQGTGTQKHGQKEREASNVQEKHKQVKATEENYQVEEYEIKYTATKEACEHDENIMKCEASNRQTANDVQLATGLRENQKKLREVEKQQQNVNRQHQSGKIEENRKTQREAFAIGQTEHEEKLKGSWKLENIDERSNVALESDSSEEKEVCKSENEMKLKLGKRIQMNKGLDEAHEIVEIEKSLKSSLDNEESDGAVIPAFRWDENGKQLKEHIELEANEIRLKEASEQRENKAYGKDQSTKKFEDVYDGHGEGNRLQESGDDKGIQKVMNQTPVQEQINRILNEAQKKKVTESTSSQTFCMEGSVPVSNENSHLEQSENMDKDVGGMEKVKGPNKALDGKERKDVGNMKNAKAPDETWEIECDEDLANQSASMHEEFIRKLKVSKESVADQTIAKMRAECKVGERQLKEVGVENQLDNKKFRAPKQMTAGDAEHSGTQSEKEEDTMTKVDYRSTEAAAETVVQETVNAQKTARWFHISQSTESKTKSINETSAIMKDTERMRRERESEKDHLRKMEEDGDRQTEREKEVEKAMLEAEREREREKDRMAVDRATLEARDKAYAEASEREERAAFERGTMEARYKALAEARERLEKACAEARDKSYIDKETTDARLKAERAAVERATAEAQDRAMEKLKNERTAFESRERLERSVSDNFCERQDSLSSDMPDPQFQNSSSSTGSRQPYSLYGAASFSERSEREGESAQRCRARLERHRRTAERAAKALAEKNMRDLLAQKEQAEKNRLSETLDAEVRRWSGGKEGNLRALLSTLQYILGPDSGWQSIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEER* 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0333 1329 Coils Coil 983 1031 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 1181 1206 - -
Pvu2g0333 1329 Gene3D DnaJ domain 1203 1329 IPR036869 -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 900 934 - -
Pvu2g0333 1329 Coils Coil 1060 1087 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 1096 1142 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 1096 1206 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 410 454 - -
Pvu2g0333 1329 PANTHER AUXILIN, ISOFORM A 6 660 - -
Pvu2g0333 1329 PANTHER AUXILIN, ISOFORM A 653 1324 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 773 799 - -
Pvu2g0333 1329 Coils Coil 559 579 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 965 1036 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 709 749 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 1143 1176 - -
Pvu2g0333 1329 ProSiteProfiles dnaJ domain profile. 1265 1329 IPR001623 -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 978 1036 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 485 511 - -
Pvu2g0333 1329 SUPERFAMILY Chaperone J-domain 1168 1328 IPR036869 -
Pvu2g0333 1329 Coils Coil 1104 1131 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 771 837 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 800 837 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 709 747 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 920 934 - -
Pvu2g0333 1329 MobiDBLite consensus disorder prediction 492 511 - -
Pvu2g0333 1329 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 6 660 - -
Pvu2g0333 1329 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 653 1324 - -
Pvu2g0333 1329 Coils Coil 1190 1241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0333 Pvu-Chr2 3285548 3291362 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0333 - - var:108335881 2012.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2627 3 48299638 48306121 Pvu2g0333 2 3285548 3291362 PCT