Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0320 ATGGCCGCTGCAAGGTTAACCTCATTCGTGGCGGTGTCATCCGCTGCGGTGGTTTCCATGTCCACGTTCTCTGATCGTGCCTACGCCGACTCTTCCTTCCGAATCCCTTTCTTCTCTTCTTCACCTTCCAATGCGCCGGCGCCGCCGAACCAGTCTTCCGACAGCAGTTCAGAGCCTCCGGCGCCTGAGGAACCTAACAAGTCGGGTTTCGACCCGGAATCGTTAGAAAGAGGAGCCAAAGCTCTCCGTGAAATCAACAGTTCTTCCTACTCAAAGCAGGTGTTTGATTTAATGCGAAAGCAGGAGCAAACTCGCCTCGCTGAATTAGACGCTGAGAAAGTTCATTACGAACTTATTCAGTCTCAAGGAGATATTGAAAGGCAGCGAAAAATGGCTGAAGAACAACGTAATTTAATACAAGAGCAAGCCCAGAGACAGGCCCAGGTGCTGCGATATGAGGATGAATTAGCAAGGAAAAGAATGCAGACAGATCATGAAGCCCAGAGGCTACATAATGTTGAATTGGTGAAGATGCAAGAGGAATCTTCTGTAAGAAAGGAGCGGGCAAGACAGTCTACTGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGATAGAGAGAGAGCTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCGGAGGCCGAAGGCCGAGTACATGAAGCAAAATTGACAGAGGATCATAACAGGAGAATGCTTATAGAACGACTGCAGGGTGAAAGGGATAAATGGCTTGCTGCAATTAACACAACTTTCGGTCATATTGAAGGTGGTCTAAGGGCCTTATTGACTGATAGGGACAAATTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCTGCAGGAGTATATACAACTAGAGAAGGTGCTAAAGTCACCTGGGGCTATATTAATCGAATTTTAGGGCAGCCATCACTGATCCGGGAATCATCGATGGCAAAATTCCCTGGATCAAAGATAATTTCTCAAGCCAAAAATAAACTTCTAAATAGTAGTACTTTGGCTGGGACAGAAAAGCCTATTGGAAGTAAAAATGGCCTTGAAAATGTAATCCTCCATCCATCGTTGAAGAAAAGAATAGAGAACCTTGCACGTGCAACATCAAACACCAAAGCCCATCAGGCACCATTTCGTAACATGCTTTTTTATGGGCCTCCAGGCACTGGTAAAACGATGGTTGCAAGGGAAATAGCAAAAAGATCGGGTTTGGATTATGCCATGATGACAGGTGGAGATGTTGCACCTTTGGCCGCCCAGGCTGTTACCAAAATTCATGATATATTTGATTGGGCCAAGAAATCTAGGAAAGGCCTATTGCTTTTTATTGATGAAGCCGATGCTTTCCTCTGCGAGCGTAACAGCACGCACATGAGTGAATCTCAGCGAAGTGCTTTAAACGCATTGCTATTCAGAACCGGTGATCAGTCTCGAGACATAGTACTTGTCCTTGCGACAAATAGACCAGGTGATCTTGACAGTGCAGTTACTGATCGCATTGATGAAGTGATTGAATTTCCGCTTCCAGGAGAGGAAGAGCGTCTAAAGTTATTGAAGCTCTATGTAAACAAATATTTATGTGATGACAACAATGGCACCAAGGGAGGCTTCTTGCCGAAGAAGCAGCCTCAGAAGATTACTATAGAAGATTTATCCGAAGATGTTTTCAGAGAGGCTGCCAAGAAAACGGAGGGATTTTCTGGCCGTGAGATCGCCAAACTCGTGGCTAGCGTCCAAGCTGCTGTCTATGGGCGCCCAGACTGCATGTTGGATTCCCAATTGTTTAGGGAGATTGTAGATTACAAGGTGGTGGAACATCACCAACGACTAAAACTAGCAGCTGAAGGTGGCCAGCCCGGCCAAATATAA 1893 0.4564 MAAARLTSFVAVSSAAVVSMSTFSDRAYADSSFRIPFFSSSPSNAPAPPNQSSDSSSEPPAPEEPNKSGFDPESLERGAKALREINSSSYSKQVFDLMRKQEQTRLAELDAEKVHYELIQSQGDIERQRKMAEEQRNLIQEQAQRQAQVLRYEDELARKRMQTDHEAQRLHNVELVKMQEESSVRKERARQSTEEQIQSQQRQTDRERAEIERETIRVKAMAEAEGRVHEAKLTEDHNRRMLIERLQGERDKWLAAINTTFGHIEGGLRALLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMAKFPGSKIISQAKNKLLNSSTLAGTEKPIGSKNGLENVILHPSLKKRIENLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIAKRSGLDYAMMTGGDVAPLAAQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSTHMSESQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYVNKYLCDDNNGTKGGFLPKKQPQKITIEDLSEDVFREAAKKTEGFSGREIAKLVASVQAAVYGRPDCMLDSQLFREIVDYKVVEHHQRLKLAAEGGQPGQI* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0320 630 MobiDBLite consensus disorder prediction 163 193 - -
Pvu2g0320 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 611 IPR027417 -
Pvu2g0320 630 Pfam ATPase family AAA domain-containing protein 3, N-terminal 56 317 IPR021911 -
Pvu2g0320 630 CDD AAA 381 516 - -
Pvu2g0320 630 PANTHER PUTATIVE ATP-ASE 1 626 IPR039188 GO:0005739|GO:0007005
Pvu2g0320 630 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Pvu2g0320 630 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 1 626 - -
Pvu2g0320 630 Gene3D - 332 536 IPR027417 -
Pvu2g0320 630 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Pvu2g0320 630 MobiDBLite consensus disorder prediction 38 62 - -
Pvu2g0320 630 Coils Coil 183 214 - -
Pvu2g0320 630 MobiDBLite consensus disorder prediction 38 74 - -
Pvu2g0320 630 SMART AAA_5 385 518 IPR003593 -
Pvu2g0320 630 Coils Coil 125 145 - -
Pvu2g0320 630 MobiDBLite consensus disorder prediction 163 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0320 Pvu-Chr2 3211810 3217339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0320 365 592 Miscellaneous Gene Families AT5G53170 28.814 5.99e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0320 K17681 - gmx:100777755 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0320 2 3211810 3217339 Pvu2g0320 2 3211810 3217339 ECH