Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0297 ATGAAGTGCCCGTATTGCTCGGCGGCGCAGGGGCGTTGCGCGACGACGAGCAGCGGGCGTTCGATCACGGAGTGCACGTCTTGCGGGCGCGTAATGGAGGAGCGACAGTCGCATCCTCACCACGTGTTCCACATGCGCGCCCAAGATAACCCTCTATGTCTGGTCACATCGGATCTCCCTCTCCCTCTCAATCAGAACGACGACGAGGACCCTTTCGAGCCCACGGGCTTCATCACTGCCTTTTCCACGTGGTCCCTCGAGCCCAGCCCACTTTACCTTCAGTCATCCCTCTCCTTCTCCGGCCACCTCGCCGAACTCGAACGCACTCTGGAATCCTCCTCTTCCTCCTCCTCTTCTTCGTCTTCAACGGTTGTGGTTGATAATCTGAGGGCCTACATGCAGATTATCGATGTTGCGTCAATTCTAGGGTTGGACTGCGACATTTCCGACCACGCTTTTCAGTTGTTCAGGGATTGTTGTTCCGCCACGTGTTTGAGAAACCGCAGTGTGGAGGCGCTTGCTACTGCCGCTCTCGTTCAGGCCATCAGAGAGGCGCAAGAGCCCAGAACCCTTCAGGAAATTTCAATTGCAGCCAATGTGCCACAAAAGGAAATTGGGAAATACATTAAGATACTTGGTGAGGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCCATTTCAGTTCATATGCCAAGATTTTGCACGCTTCTTCAGCTCAATAAATCTGCCCAGGAACTGGCTACTCACATTGGAGAGGTCGTGATCAACAAATGCTTCTGTACTCGCAGGAATCCTATTAGCATCTCAGCTGCTGCTATATATTTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATTTGTAAGGTGACTGGTCTTACTGAAGTCACTCTCCGTAAAGTGTATAAGGAACTATTGGAGAATTGGGATGATTTGCTTCCCTCTAATTACACCCCAGCTGTTCCTCCAGAGAGGGCATTTCCCACAACGATAATTGCTTCTGGCCGTTCTTCAACACCTAAGGCTGATGCTGGAGAGTCTATCTCTTCTTTGGACTTAGAAAAGTTGACAGATATTAAACCTAGCAAACCTAATGAGGTCTCAGGCATAGTTCATCAGCCCAGAGGGAAGGATGAGGCTGACGGTAAAAGCAATGATCAAGCAAGCCATTCCACAGTTAATCAACAGCCACCTTTTTGGCAATCCCAGCTTCCCAGTGGTACCCACAATCATCAGAATGTATTACAAGGAATGGATATTGATGTATTGCAGCGAAGCCACCAACAGCCTGAACACATGGCAGAGGATACAAATGGTGCTGCAAACGGTAATTCGATTAAATCAAGCCAACTTTGCAGTCCTCCTGCTTCGAGTGCAAGTTCTGTTATGAGACAGTTTTCAGCTCCCCCTTCAGCTGGCCCTTCAAATGTTCGATTAGGTCAGTCACCAAAGATAATTCCAGGTTATCCGGATCACTGA 1488 0.4913 MKCPYCSAAQGRCATTSSGRSITECTSCGRVMEERQSHPHHVFHMRAQDNPLCLVTSDLPLPLNQNDDEDPFEPTGFITAFSTWSLEPSPLYLQSSLSFSGHLAELERTLESSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIASGRSSTPKADAGESISSLDLEKLTDIKPSKPNEVSGIVHQPRGKDEADGKSNDQASHSTVNQQPPFWQSQLPSGTHNHQNVLQGMDIDVLQRSHQQPEHMAEDTNGAANGNSIKSSQLCSPPASSASSVMRQFSAPPSAGPSNVRLGQSPKIIPGYPDH* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0297 495 Gene3D - 229 325 - -
Pvu2g0297 495 MobiDBLite consensus disorder prediction 334 348 - -
Pvu2g0297 495 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 PRINTS Transcription initiation factor IIB signature 175 194 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 PRINTS Transcription initiation factor IIB signature 201 216 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 PRINTS Transcription initiation factor IIB signature 230 248 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 PRINTS Transcription initiation factor IIB signature 264 280 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 PRINTS Transcription initiation factor IIB signature 296 310 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 MobiDBLite consensus disorder prediction 389 415 - -
Pvu2g0297 495 MobiDBLite consensus disorder prediction 436 481 - -
Pvu2g0297 495 CDD CYCLIN 131 212 IPR013763 -
Pvu2g0297 495 SMART cyclin_7 229 310 IPR013763 -
Pvu2g0297 495 SMART cyclin_7 133 214 IPR013763 -
Pvu2g0297 495 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 480 IPR000812 GO:0006352|GO:0070897
Pvu2g0297 495 Gene3D - 129 220 - -
Pvu2g0297 495 MobiDBLite consensus disorder prediction 429 495 - -
Pvu2g0297 495 SUPERFAMILY Cyclin-like 227 325 IPR036915 -
Pvu2g0297 495 CDD CYCLIN 231 309 IPR013763 -
Pvu2g0297 495 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 480 - -
Pvu2g0297 495 MobiDBLite consensus disorder prediction 334 415 - -
Pvu2g0297 495 Pfam Transcription factor TFIIB repeat 131 212 IPR013150 GO:0017025
Pvu2g0297 495 Pfam Transcription factor TFIIB repeat 229 310 IPR013150 GO:0017025
Pvu2g0297 495 SUPERFAMILY Cyclin-like 130 220 IPR036915 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0297 K03124 - gmx:102662353 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0297 2 3010927 3013325 Pvu2g0297 2 3010927 3013325 ECH