Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0287 ATGGAGCCTCGAAAAAAAGCTTTGCCATTATCTTGGTTCTTGATCTTCTTCGTTATCGTTTCCTTGTGGGGGGTGAAGGCATCAAAGTCTCAAGAGGGACCTGTGGTGGAAAAGGATCAGAGGAGGACATTACTTGCCACAGAATTCGGACAGATAACTGCCCTTGACATCAAGGAAGAACCAGAGAAACAGCCCTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTTCCTGTGCTTCTACATGCAGATATGGTCTTTTATGTTCACACAGGGAGTGGAAAGCTGACTTGGGCAAATGATGATGGTACTGGCACGATCCCTTTACGCGAAGGAGATCTTTGCAATCTCAACGAAGAAACTGTTTTCTATATACAGAGCGACTTAGAGGCTGAGAGAAGGAAACTTAGGATTTATGCAATGTTCACCAATACAGAAGACAATACTTTTAATCCATCAATCGGTGCTTATTCAAGAATCGACGAACTGGTCAAGGGCTTTGATAAGAAAATCATGCAAGCAGCTTTAAAGGTGCCAGATGATTTGATTGAAGAAATCATTAACAAGAAAAACACCCCAACTATAGTGCATGCGGATTCAAAGAAGATAAATATTGTCCAGAAACTGGAGGCTTCGTTTCTTAAAAACTTTCTAGGTGTTGGGTCCAACTCCAACAAACTCGAAACATACAACATCTTTGATCATGACCCTGACTTCAAAAATCGTAATGGCTGGAGTGTAGCTGTGTCCAAAACGCAACTAAAGTCATTGAAGCAGACTAACATTGGATTTCTGATGGTGCATTTGACCAAGGGATCAATTTTGGGGCCTCATTGGAACCCGAAGGCAACAGAGTTGGCAGTGGCGGTAGAAGGGAGAGGCATGGTCCGAGTGGTATGTGGAAGCAGCAATGAAGATGAGACAGAAAGCCTAAACATGAGATTTAAGGTTAATCCGGGCGATGCTTTTGTGGTGCCTAGGTTTCATTCAATGGCTCAGATGTCATTCAACGATGAACCGTTTGTTTTTCTTGGCTTCAGCACTTCAGCAAAGAACAACCATCCTCATTTTTTGGCGGGAAAGGGATCTGTGCTTTATAATCTGAACAGGCAGATACTGGCCACCTCTTTTGGTGTAAGTGACAGAACCATTGACGAGCTTTTGCATTCTCCCAGAGATTCCATCATTTTCGGGTGCAGTTCCTGCGCGGAGGAAGAGGAGAAGATAATGAAGGAGGAAGAGGAGGAGGAAGAAAGGGAGAGGAAGAGAGAGGAGGAGGAGACGAAGAGAGAGGAAGAGGAGGAAGACAGGAAGAAAGAGAGAGAGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGACAACAAGAAGAGAGGGAAAAGAAGCGTGAGGAGGAAGAAGAGAGGGAGCAGCAAGAAGGAACTGGGGGAGAGAAAGAAAGGGAAAGAGAAGAAGAGATAGAGAAGGAGCAAGAAGAAGCTGGGAGAGAGAAAGAAAGGGAAAGAGAAGAAGAGATAGAGAAGGAGCAAGAAGAAGCTGGGAGAGAGAAAGAAAGGGAAAGAGAAGAAGAGATAGAGAAGGAGGAAGAAGAAGCTGGGAGGCAACAGGAGAAGAGGGAAAAGAAAAGAGAGAAAGAAAAAGGTGAAGGGAAGGAAGCAGAGGAGGAAGGCAGGAGGGAAGCAGAAAAGGAAGCAGAAGAAGCATCAGCTAAGAGAGAGCAAGAAAAGAGAAGGAAAAAAGAAGAAGCAGCAGCTAAAGAAGAAGCAGCAGCTAAGAGAGAGCAAGAAAAGAGGGAAATGAGGAGACAAGAGGAAGCTGAAAAGGAGCAAGAAGAAGATAAAAGGGAAGGGGAATCAGAAGTAGCACAGAAGGAGCAAGCAGAAGCTAAAAGAGAGCATGAAAAGAGAGAAAAGAAGCGACAGGAGGAGGGACAAAGGGAAGGAGAAGAAGAAGAAGAAGATCAGGCATGGGGGGAGAGTGTGAGGAGAGAGAAGGGGAAAAGATCAGAAGAAGAAGAAGTAGCACAAGGGGAGCAAGAACAAGCCAAGAGACAACAAGAAGAGAGGGAGAAGAGAAGAGATGAAGATGGTGACCATGATCACATTGAAAGTGAAGCAGAAGAGAATAGCTACAAGAGCAGTTTCGAAGGAAGGAGAGCTCTGAAAGTCAGGAACCTTTGA 2184 0.4464 MEPRKKALPLSWFLIFFVIVSLWGVKASKSQEGPVVEKDQRRTLLATEFGQITALDIKEEPEKQPYHLQFITLEPNSLFLPVLLHADMVFYVHTGSGKLTWANDDGTGTIPLREGDLCNLNEETVFYIQSDLEAERRKLRIYAMFTNTEDNTFNPSIGAYSRIDELVKGFDKKIMQAALKVPDDLIEEIINKKNTPTIVHADSKKINIVQKLEASFLKNFLGVGSNSNKLETYNIFDHDPDFKNRNGWSVAVSKTQLKSLKQTNIGFLMVHLTKGSILGPHWNPKATELAVAVEGRGMVRVVCGSSNEDETESLNMRFKVNPGDAFVVPRFHSMAQMSFNDEPFVFLGFSTSAKNNHPHFLAGKGSVLYNLNRQILATSFGVSDRTIDELLHSPRDSIIFGCSSCAEEEEKIMKEEEEEEERERKREEEETKREEEEEDRKKERERKREEEEAKRQQEEREKKREEEEEREQQEGTGGEKEREREEEIEKEQEEAGREKEREREEEIEKEQEEAGREKEREREEEIEKEEEEAGRQQEKREKKREKEKGEGKEAEEEGRREAEKEAEEASAKREQEKRRKKEEAAAKEEAAAKREQEKREMRRQEEAEKEQEEDKREGESEVAQKEQAEAKREHEKREKKRQEEGQREGEEEEEDQAWGESVRREKGKRSEEEEVAQGEQEQAKRQQEEREKRRDEDGDHDHIESEAEENSYKSSFEGRRALKVRNL* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0287 727 SUPERFAMILY RmlC-like cupins 43 393 IPR011051 -
Pvu2g0287 727 CDD cupin_7S_vicilin-like_N 44 206 - -
Pvu2g0287 727 PANTHER PREPROMP73 11 446 - -
Pvu2g0287 727 MobiDBLite consensus disorder prediction 410 727 - -
Pvu2g0287 727 SMART Cupin_1_3 233 388 IPR006045 -
Pvu2g0287 727 Gene3D Jelly Rolls 224 404 IPR014710 -
Pvu2g0287 727 Coils Coil 403 476 - -
Pvu2g0287 727 MobiDBLite consensus disorder prediction 657 727 - -
Pvu2g0287 727 Coils Coil 481 653 - -
Pvu2g0287 727 Gene3D Jelly Rolls 26 214 IPR014710 -
Pvu2g0287 727 Coils Coil 669 696 - -
Pvu2g0287 727 MobiDBLite consensus disorder prediction 532 647 - -
Pvu2g0287 727 MobiDBLite consensus disorder prediction 417 523 - -
Pvu2g0287 727 Pfam Cupin 233 386 IPR006045 -
Pvu2g0287 727 PANTHER OS03G0336100 PROTEIN-RELATED 11 446 - -
Pvu2g0287 727 CDD cupin_7S_vicilin-like_C 240 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0287 Pvu-Chr2 2939310 2942252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0287 4 419 Miscellaneous Gene Families AT2G18540 44.150 1.10e-106 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0287 - - pvu:PHAVU_002G027900g 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0287 2 2939310 2942252 Pvu2g0287 2 2939310 2942252 ECH