Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0259 ATGCGGATGCACTTGAGGTCGTTCTTCTGCGAGGTTAACCTTTTGAACAGGTTAAGCTCGCAAGTGCAATCTCGTTCCTATGCCCGTCGTCGTGAACCGTTTCTCACAAAAGTTTCTCACTACCTCCACCGTGCCAAACTCATTGACTCCATTAGACTCACTCTACGCTCTAACAACCCCAACTCTTCCCTTCCCTCTCTCATAAACCACCGTCTTTTTGACTCTTTCGTGCTCACTCATGCCCTTCGCTCTGCCCCCTCTGCAGATTCTGCTCTTTCCCTTGTCCATGCCCTCGAAAAGAATTCCAGTTTTTCCCACACCCACCACACACTCCATGCACTTGCAACTGTGCTTGCCAAGGCTGGTAGATGCTCCGAGCTCAAATCCCTCATTGATGCTATCCGAGCCAACCGATTCGGCACTATTAGGATCAGCTTCATGAATCTCATGCAGTGGCATGCTGCAGCTAAGGACCTTGACACTGTTCTTCAAGTGTGGGAAGAGTATACACTGGAGAGCAACCATCTCTGCACTGAATCATATAACATTGTTATGGCTCTTTATGCTCAAATGAAAAGAGACTCGGAGGCTGTACGAGTTTTTCAGAGGATGATTGATGAGGGGTCTCTGCCGAATTGCAGAAGCTGCACTATAATAATCGAGCACCTTGTGAAGTCCCGGAAGTTATCAGAAGCATTGGAAGTTTTTAACCTGTTGCCTTTGATGAGGGTCAAACGCACTTTGAAGCAGTACTCCGTTCTGCTTGAGGGTTTTGTAGGTAGCAAAAGGTTTGATGAAGTGAGAATTTTAGTTCATGAAATGCAGGTTGATGGAATACTTCCTAGTAGAGGCGTGAGTTTGTTGCTGCAGCAGATGAAGGAGGAAGGAATTCTTGAGGATAAGGAGCAATTATTGCGAGGAATTTTGCCAGATGAGAGAATCAGGAGAGTAAGTTATTCTATTGATAGTGGTGACGAGGCTGAGGATGAGAATGAGAATGAGGGTGAAAATGAGAATATAAATGATGCTAGTCAATGTGATCTTGTTGATGGAGTTCATTTAAAACCGTGGCTAGACCCACGGGCTTTGGTCAGTGCCTTGCGGAATTGGAGTCCTGATGAGGTAGCAGCACTGGAGGGTGCTAACTTTGTATGGACAACAAGGTTGGTTTGCAAGATGCTTAGAAACTTCAAAACACCAGAAGCGGCATGGAGTTTCTTCTGCTGGGTTGCTAATCAAAGTGGATTTATTCATGACATATACACGGTACAAAGAATCATGACCCTACTAGCACGCCATGGACGTACTGACTTGGTTAATACACTCATCTCCAAGATCAGAATGGAGGGAATGAGACTACCATTCAGCACCATCAGGCTGATCATTGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTTTGAAGGTTTTCAATGATGATCGAATTCTTTGCGGTCCCATATCAAATGTTAACCTGATGCTGCTGTATTCGTCTCTTCTAAGAACATTGGCGAAGTGTGGAAGAAACTCCGATGCCTTGGATATGCTTGATGACATGATTTTAAATGGTATTTGCCCAGATATCCAGACATTTTCAGGCCTAATGCTCTACTTTTCACAGCTTGGGGACATAAAAACAGTGCAAAAGCTCTTTGCAATGGTTAGGCAGAGCGGTCTAGAGCCAGATGCTTATTTGTTTAAGGTATTAATCCAAGGTTATTGCAAGTCAAATAGAGCTGCACTAGCATGGAGGCTATTTGAAGACATGAAGAATTCTGGTTTATTGCCTGACTCTGCCACCAAAGAGTTGCTAGTGAAGAGTCTCTGGAAAGAGGGGAGACGAAGAGAGGCTGCAGCAGTGGAAGAGAGTTGCGAGGAAATAAATACGGTTCTTCCACTTGCATTGCAAGGTCATGCATGGACTGTCAGCTCTGCAGATCTCACAAGAGTTTATAGTATTTATTCTAACTCTTTTGCTTAA 1983 0.4433 MRMHLRSFFCEVNLLNRLSSQVQSRSYARRREPFLTKVSHYLHRAKLIDSIRLTLRSNNPNSSLPSLINHRLFDSFVLTHALRSAPSADSALSLVHALEKNSSFSHTHHTLHALATVLAKAGRCSELKSLIDAIRANRFGTIRISFMNLMQWHAAAKDLDTVLQVWEEYTLESNHLCTESYNIVMALYAQMKRDSEAVRVFQRMIDEGSLPNCRSCTIIIEHLVKSRKLSEALEVFNLLPLMRVKRTLKQYSVLLEGFVGSKRFDEVRILVHEMQVDGILPSRGVSLLLQQMKEEGILEDKEQLLRGILPDERIRRVSYSIDSGDEAEDENENEGENENINDASQCDLVDGVHLKPWLDPRALVSALRNWSPDEVAALEGANFVWTTRLVCKMLRNFKTPEAAWSFFCWVANQSGFIHDIYTVQRIMTLLARHGRTDLVNTLISKIRMEGMRLPFSTIRLIIDFYGISKNADAALKVFNDDRILCGPISNVNLMLLYSSLLRTLAKCGRNSDALDMLDDMILNGICPDIQTFSGLMLYFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKVLIQGYCKSNRAALAWRLFEDMKNSGLLPDSATKELLVKSLWKEGRRREAAAVEESCEEINTVLPLALQGHAWTVSSADLTRVYSIYSNSFA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0259 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Pvu2g0259 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 563 597 IPR002885 -
Pvu2g0259 660 PANTHER OS01G0167750 PROTEIN 3 659 IPR044175 -
Pvu2g0259 660 Pfam PPR repeat 180 208 IPR002885 -
Pvu2g0259 660 Pfam PPR repeat 251 279 IPR002885 -
Pvu2g0259 660 Pfam PPR repeat 215 238 IPR002885 -
Pvu2g0259 660 Pfam PPR repeat 497 525 IPR002885 -
Pvu2g0259 660 Gene3D Tetratricopeptide repeat domain 492 650 IPR011990 GO:0005515
Pvu2g0259 660 MobiDBLite consensus disorder prediction 323 342 - -
Pvu2g0259 660 Gene3D Tetratricopeptide repeat domain 80 347 IPR011990 GO:0005515
Pvu2g0259 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 493 527 IPR002885 -
Pvu2g0259 660 Pfam PPR repeat family 562 609 IPR002885 -
Pvu2g0259 660 Gene3D Tetratricopeptide repeat domain 379 486 IPR011990 GO:0005515
Pvu2g0259 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 528 562 IPR002885 -
Pvu2g0259 660 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Pvu2g0259 660 TIGRFAM PPR: pentatricopeptide repeat domain 497 529 IPR002885 -
Pvu2g0259 660 TIGRFAM PPR: pentatricopeptide repeat domain 567 599 IPR002885 -
Pvu2g0259 660 TIGRFAM PPR: pentatricopeptide repeat domain 180 213 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0259 415 645 Glycosyltransferase AT1G05670 27.897 3.05e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0259 - - gmx:100779372 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0259 2 2728171 2730948 Pvu2g0259 2 2728171 2730948 ECH