Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0236 ATGACAGGGTCATCGTTGAAGGGGCATGCATTGTTAGAGGAAGGAAGTTCACATGGAAAAAGGTTTGGGAAGCCAAAGAAAGATGAATTCGATGGTTATAACTCTGATAATCATCCAAGAAAAAATAGCCCTGTGACGTTGGCAGCACCTCATTTGGATCCTCAAATGGTAGTAGATAGTACTTCTTACGATCCTTCCCTTTCTCCCTTGTCCAAATCCCCATGGTCCTCTCACATGAACGAAGATGCTCTAATTTCCAACGACAACGAAGCTCTAATAGGATCCCTGGTCCGAGAAGAGGGTCACATTTACTCCCTCGCTGCAACCAAGGACCTGTTATACACAGGTTCAGATAGCAAAAATATTCGGGTGTGGAAGAACCAAAAGGAGTTCACGGGGTTCAAATCCAACAGTGGCTTGGTGAAAGCGATCGTGATTGCGGGAGAAAAAATCCTCACAGGACACCAAGATGGAAGAATAAGAGTGTGGAAAGTTTCAGGAAAAAACGACCAACAACACAAGCGTGTGGCAACATTGCCAACGTTAAGAAACTACATCAAATGTTCGGTGAAACCAAGTAATTACGTGGAAGTGAAACGACACCGCAACGTGTTGTGGATCAAGCACTACGACGCCATTTCATGCCTGGGCATAACGGAGGATCATTCTTATATATACTCCGCCTCGTGGGATAAAACTTTCAAAGTATGGCGAACGTCGAATTTTAAGTGTTTGGAGTCTGTGACAGCACATGATGATGCTGTTAATGCACTTGTTGTCGGGTTGGAGAACTTGGTTTTCACGGGCTCAGCAGATGGCACGGTTAAGATTTGGCAACGCGATGTACAAGGGAAAGGGACAAAACATTTGTTCTCGCACACGTTGTTGAAGAAAGAGTGTGCGGTGACGGCGTTGGCCATGAGCGTTGATGGGAGTTTTTTATATGCCGGGTCTTCCGATGGGTTGGTAAATTACTGGGCGAAAGAGACAAATTTGGAGCACAGGGGTGTATTGAAGGGACACAAGTTGGCGGTTTTGTGTTTGGCTGCAGCAGGAAATTTGGTATTCAGTGGCTCTGCCGACATGTCCATATGTGTATGGAAGAGGTCTCTGAGTGAGGAGCACACATGCGTTCATGTTTTGTCCGGCCACGCTGGCCCAGTTAAGTGTTTGGCGGCGGAGCGGGATCCCGACGCCATGTGTAACGAACGACGGTGGATTTTGTACAGTGGTAGTTTGGATAAGTCCGTTAAGATGTGGAAGGTTTCCGAACATGCAACTCCACAAAACAATCACCAGCCACCAAAACTTAGCGTTGATCACTTCCCGAGAATCTCATCATTCAAGAGATCAAACTCCAAGAGATTGATCTAG 1374 0.4622 MTGSSLKGHALLEEGSSHGKRFGKPKKDEFDGYNSDNHPRKNSPVTLAAPHLDPQMVVDSTSYDPSLSPLSKSPWSSHMNEDALISNDNEALIGSLVREEGHIYSLAATKDLLYTGSDSKNIRVWKNQKEFTGFKSNSGLVKAIVIAGEKILTGHQDGRIRVWKVSGKNDQQHKRVATLPTLRNYIKCSVKPSNYVEVKRHRNVLWIKHYDAISCLGITEDHSYIYSASWDKTFKVWRTSNFKCLESVTAHDDAVNALVVGLENLVFTGSADGTVKIWQRDVQGKGTKHLFSHTLLKKECAVTALAMSVDGSFLYAGSSDGLVNYWAKETNLEHRGVLKGHKLAVLCLAAAGNLVFSGSADMSICVWKRSLSEEHTCVHVLSGHAGPVKCLAAERDPDAMCNERRWILYSGSLDKSVKMWKVSEHATPQNNHQPPKLSVDHFPRISSFKRSNSKRLI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0236 457 PANTHER BNAANNG11810D PROTEIN 7 435 - -
Pvu2g0236 457 Gene3D - 41 201 IPR015943 GO:0005515
Pvu2g0236 457 Gene3D - 202 446 IPR015943 GO:0005515
Pvu2g0236 457 SMART WD40_4 283 327 IPR001680 GO:0005515
Pvu2g0236 457 SMART WD40_4 374 421 IPR001680 GO:0005515
Pvu2g0236 457 SMART WD40_4 127 164 IPR001680 GO:0005515
Pvu2g0236 457 SMART WD40_4 89 126 IPR001680 GO:0005515
Pvu2g0236 457 SMART WD40_4 200 238 IPR001680 GO:0005515
Pvu2g0236 457 SMART WD40_4 331 368 IPR001680 GO:0005515
Pvu2g0236 457 SMART WD40_4 241 279 IPR001680 GO:0005515
Pvu2g0236 457 PRINTS G protein beta WD-40 repeat signature 151 165 IPR020472 -
Pvu2g0236 457 PRINTS G protein beta WD-40 repeat signature 266 280 IPR020472 -
Pvu2g0236 457 PRINTS G protein beta WD-40 repeat signature 408 422 IPR020472 -
Pvu2g0236 457 Pfam WD domain, G-beta repeat 292 326 IPR001680 GO:0005515
Pvu2g0236 457 Pfam WD domain, G-beta repeat 336 368 IPR001680 GO:0005515
Pvu2g0236 457 Pfam WD domain, G-beta repeat 100 126 IPR001680 GO:0005515
Pvu2g0236 457 Pfam WD domain, G-beta repeat 376 421 IPR001680 GO:0005515
Pvu2g0236 457 Pfam WD domain, G-beta repeat 243 278 IPR001680 GO:0005515
Pvu2g0236 457 Pfam WD domain, G-beta repeat 209 237 IPR001680 GO:0005515
Pvu2g0236 457 MobiDBLite consensus disorder prediction 13 36 - -
Pvu2g0236 457 MobiDBLite consensus disorder prediction 1 51 - -
Pvu2g0236 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 206 247 IPR001680 GO:0005515
Pvu2g0236 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 295 326 IPR001680 GO:0005515
Pvu2g0236 457 CDD WD40 100 421 - -
Pvu2g0236 457 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 248 279 - -
Pvu2g0236 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 338 368 IPR001680 GO:0005515
Pvu2g0236 457 ProSiteProfiles Trp-Asp (WD) repeats profile. 248 279 IPR001680 GO:0005515
Pvu2g0236 457 SUPERFAMILY WD40 repeat-like 97 431 IPR036322 GO:0005515
Pvu2g0236 457 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 7 435 IPR045182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0236 Pvu-Chr2 2483569 2484942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0236 206 422 Miscellaneous Gene Families AT5G08390 23.661 1.33e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0236 - - gmx:100819990 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0236 2 2483569 2484942 Pvu2g0236 2 2483569 2484942 ECH