Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0052 CAATCATGGCAACTCTTCCAAGCACTCCAAGTTCAAGTACGTCATATTCCTTGCCTCGTCTACAAACTTGATCACACTAATTATCTCTTATGGGAAACTACGATCTTGCCTATCATCAGAGGTCACAAATTAGATGGCCATGTCTTTGGCAACAAACCTTGTCCTCCAGAGTTCTTGCCAAGAACCACACCAGGCAGCACAGTAAAAATACCAAACCCAGAGTTTGAAGAATGGGTCTCAAATCACCAATTACTTTTAGGATGGTTATACAGCACCATGAGAACTGATATAGCATCTCAGTTGATGCGAAACTCGACATTGAAAGAATTGTGGGATGCAGCCAAAGAACTTTCTGGGGCACACACAAGATCAAGGATTGTCTATTACAAAGCTGAATTACAGAAAATGAGGGAGGGAGGCATGAAGATGGAGAAATATCTGACAACTATGAAGTCTATTGCTGATAATCTCGCTGTGGCAGGAAACCTGATATCTCAATCTGAATTAACAATTCAAATTTTGAGTGGTCAGAATACACCCCAATTGTCACTCTTCTGA 558 0.4104 QSWQLFQALQVQVRHIPCLVYKLDHTNYLLWETTILPIIRGHKLDGHVFGNKPCPPEFLPRTTPGSTVKIPNPEFEEWVSNHQLLLGWLYSTMRTDIASQLMRNSTLKELWDAAKELSGAHTRSRIVYYKAELQKMREGGMKMEKYLTTMKSIADNLAVAGNLISQSELTIQILSGQNTPQLSLF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0052 185 Pfam gag-polypeptide of LTR copia-type 78 175 - -
Pvu2g0052 185 PANTHER - 30 176 - -
Pvu2g0052 185 PANTHER - 30 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0052 - - pvu:PHAVU_002G005200g 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0052 2 603693 604250 Pvu3g1599 3 35925895 35931454 PCT