Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0043 ATGAGTTCTCTCACCGGACTTGCTCCACTTGAAGCTGTGCTCTTTGATGTAGATGGAACACTCTGTGATTCTGATCCACTCCACTATGATGCTTTGCGTGAAATGCTCCTAAAGATTGGTTTTAATGGAGGTGTTCCTATAACGGAGGAATTTTTTATTGAAAATTTTTCTGGCAAGAACAACGTTGATACTGCCTTAGTTGCCTTTCCTGGTGATCTGGAAAAAGGTTTGAAGCTTTTAGAAGATAAGGAAGTCACGTTCCGGAGATTGGCGGAGGAGAAACTGAAGCCTGTGAAAGGCCTTGATAAATTGACGTCATGGGTTGAAAACCATGGTCTGAAGAGAGCTGCAGTTACCAATTCCTCAAGAGTAAATGCAGAACTCATGATCTCAAAACTTGGCCTCTCGGACTTCTTTGATGTTCTTATTATTGGTGATGAATGTGAACGTGGTAAACCTTATCCCGACCCCTACTTGAAAGCTCTTGAAGTTCTGAAGGCATCGAAGGATCATGCATTTGTATTTGAGGATTCTTTTTCAGGGATTACAGCTGGAGTGGCAGCTGAGATGCCGGTTATTGGCATAGCTACACGAAACCCAGAGGATTTACTGATGAAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCAGCTTTAGAAGAACTTGACAAGCCTGGTGCCGATAAGTTGGAATTTCTGGATAAAAACATTTAG 732 0.4221 MSSLTGLAPLEAVLFDVDGTLCDSDPLHYDALREMLLKIGFNGGVPITEEFFIENFSGKNNVDTALVAFPGDLEKGLKLLEDKEVTFRRLAEEKLKPVKGLDKLTSWVENHGLKRAAVTNSSRVNAELMISKLGLSDFFDVLIIGDECERGKPYPDPYLKALEVLKASKDHAFVFEDSFSGITAGVAAEMPVIGIATRNPEDLLMKAKPAFLIKDYEDPKLWAALEELDKPGADKLEFLDKNI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0043 243 Pfam Haloacid dehalogenase-like hydrolase 13 195 IPR041492 -
Pvu2g0043 243 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 10 218 - -
Pvu2g0043 243 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 2 231 - -
Pvu2g0043 243 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 10 218 - -
Pvu2g0043 243 Gene3D - 11 219 IPR023214 -
Pvu2g0043 243 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 10 21 IPR006439 -
Pvu2g0043 243 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 108 121 IPR006439 -
Pvu2g0043 243 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 139 155 IPR006439 -
Pvu2g0043 243 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 2 231 - -
Pvu2g0043 243 CDD HAD_BPGM-like 12 197 - -
Pvu2g0043 243 Gene3D Putative phosphatase; domain 2 25 93 IPR023198 -
Pvu2g0043 243 SUPERFAMILY HAD-like 9 227 IPR036412 -
Pvu2g0043 243 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 195 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0043 Pvu-Chr2 557077 559275 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0043 - - vra:106773023 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0043 2 557077 559275 Pvu2g0043 2 557077 559275 ECH