Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0042 ATGACTGCTTCTTCAGATTGCATCTCCAGCCAGAGTTCTCTCACCAGACTTGCTCCTCTCGAAGCAGTGCTCTTTGATATAGATGGAACACTCTCTGATTCTGATCCTCTCCACTACCATGCCTTCCGTGAAATGCTTCTAGAGATTGGTTTTAATGGTGGTGCTCCCATAACCGAGGAATTCTTTATTGAAACTGTTGCTGGCAAACACAATGATGATATAGCCTTGGCTCTCTTTCCTGATGATCTGCCACGAGGTTTAAAGTTTGTGGAAGATAAGGAAGCCATGTTCCGGAAATTGGCAGCAGAGCAACTGAAGCCTTTGAATGGCCTTGATAAAGTGAGGAAATGGATTGAAAATCGTGGGTTGAAGAGAGCTGCAGTTACCAATGCTCCAAGAGAAAATGCAGAGCTCATGATCTCCGTACTTGGCCTCTCAGATTTCTTTGAGGCTGTCATTATTGGTGGTGAATGTGAACATGCCAAGCCTCATCCAGACCCCTACCTGAAAGGTCTTGAAGCTCTGAAGGCATCAAAGGATCACACATTTGTATTTGAGGATTCTTTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTCATTGGTTTGGCTACTCGAAATCCAGAAAATCTATTGATGGAAGCAAAACCTGCATTTCTGATTAAGGATTATGATGATGCAAAATTGTGGGCTGCTTTGGAAGAACTAGACAAGGCTAGTAGCACTCTTTCAGTTTGA 744 0.4395 MTASSDCISSQSSLTRLAPLEAVLFDIDGTLSDSDPLHYHAFREMLLEIGFNGGAPITEEFFIETVAGKHNDDIALALFPDDLPRGLKFVEDKEAMFRKLAAEQLKPLNGLDKVRKWIENRGLKRAAVTNAPRENAELMISVLGLSDFFEAVIIGGECEHAKPHPDPYLKGLEALKASKDHTFVFEDSFSGIKAGVAAGMPVIGLATRNPENLLMEAKPAFLIKDYDDAKLWAALEELDKASSTLSV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0042 247 Gene3D Putative phosphatase; domain 2 35 103 IPR023198 -
Pvu2g0042 247 SFLD Haloacid Dehalogenase 20 230 - -
Pvu2g0042 247 Gene3D - 21 228 IPR023214 -
Pvu2g0042 247 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 5 243 - -
Pvu2g0042 247 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 20 230 - -
Pvu2g0042 247 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 5 243 - -
Pvu2g0042 247 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 93 204 IPR006439 -
Pvu2g0042 247 Pfam Haloacid dehalogenase-like hydrolase 23 204 IPR041492 -
Pvu2g0042 247 SUPERFAMILY HAD-like 17 237 IPR036412 -
Pvu2g0042 247 CDD HAD_BPGM-like 22 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0042 Pvu-Chr2 553272 555886 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0042 - - gmx:100793483 436.802