Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0040 ATGTCAAGAACAGTGGAAGTCACGGTTTTATCCGCAGAGAATCTCCAAATGAACAGAAAACCCGCAAGAGGAAACACATTTGTCACGGTTCACTCCGACGCCAGCACTGACGCAGGTGCCGTCACGAAAGTGGACTCAGAGGGAGGAAGCTACCCTTCGTGGAACGAGAAGGTTGTGGTGAACGTGCCGTTGCATGCAAGGTTCATATCCGTTGAGGTGAAGTGCAAAACGTCGTCGTCGTCGTCGTTGACGGGGTCTAACAGTGTTGGCGTGGCGCGAATACCGGTTTCTGATTTCATTGGAGGGTACGTGCCGGAAAACCAGTTGCATTTCTTGAGCTACAGGCTGTGGGACGGTAACGTTAGGAGAAACGGGGTTATAAATATTTCGGTGAGGGTGAAAGTGCCGGAACGTTCTTCTTGTAGTTCCAGTTCCATGTCGTTTGCGGCGGTGACTGGGGTGCCGGTGGCCGGTAATGGCTCCACCGGAGTTGTCACAGGGATTCCAGCTCTTTGGTTGAACTACCAAAGAAATCCTTGA 540 0.5185 MSRTVEVTVLSAENLQMNRKPARGNTFVTVHSDASTDAGAVTKVDSEGGSYPSWNEKVVVNVPLHARFISVEVKCKTSSSSSLTGSNSVGVARIPVSDFIGGYVPENQLHFLSYRLWDGNVRRNGVINISVRVKVPERSSCSSSSMSFAAVTGVPVAGNGSTGVVTGIPALWLNYQRNP* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0040 179 PANTHER INGRESSION PROTEIN FIC1 4 169 - -
Pvu2g0040 179 CDD C2_SRC2_like 4 129 IPR044750 GO:0006952
Pvu2g0040 179 PANTHER - 4 169 - -
Pvu2g0040 179 Pfam C2 domain 4 104 IPR000008 -
Pvu2g0040 179 SMART C2_3c 4 108 IPR000008 -
Pvu2g0040 179 Gene3D C2 domain 3 134 IPR035892 -
Pvu2g0040 179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 132 IPR035892 -
Pvu2g0040 179 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0040 Pvu-Chr2 543083 543955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0040 - - gmx:100500298 285.034