Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0039 ATGATGTTACACTTTCAAGCAAAATGCATTAAACACATGGAAGATTTTACTCAGAGGTGTATAACTAGATGGTCAATTACACTTTATGCTCGTTACTCCAATATTTCTCTGAAGAAGTCTAAGCTTGCTCCTTTGCAGGAGAGACGAATGATAGACCAGTGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAATGGTTGCTTCAGCTTGCGCAAGGGAAGACCTGATGGTGGCAATGGGGGAACAGGCGGTGATGTGATTCTGGAATGCTCTCCCAGAGTTTGGGACTTCAGTGGTTTGCAGCGTCATCTGATAGCCGAGAAAGGAGGACATGGATCATCAAAAAAGTTGATAGGTAGCAGGGGTGCTGATAAGGTTGCCCGTGTACCGATTGGCACTGTACTTCATCTTGTCAATGGTGATATTCCTTCCGTTGTCAAAACTCAATCCTCGACTGATGTAGACCCTTGGGATATTCCAGGGGCACTTGTTGATGATCTTCATGACCCTGGCTATGGTTCTACCTCCAATGTTACAAGAGTGGAAGTAAACGCAACACATTCTACTGGCTTCTCCTCAACACAAGCTGAAGAAGCAAATGCTGAGAAATCTGAAAAATCAAGACAAGTTACATCAACAGATGCATTCTCTCAACTCTCCACTACTAATGGAGCTCCTGAATTTTGTACTGAGGATATAGAAGAGAACCAAGAGATAATATACAATGTTGCTGAATTAACAGAAGAAGGTCAACAAATTGTCATTGCTCGCGGAGGAGAGGGTGGTCTGGGCAATGCGTATTGTTCCAAAGATTCAATGAAAAATGTACCTAATCTTCAGGATCCTAACGGTATCCACTCCTCTCTGCATGCAGGTTCACCTGGTTTTGAGACCGTTCTTATATTAGAACTCAAGAGTATTGCTGATGTAAGCTTTGTGGGAATGCCTAATGCTGGTAAAAGCACTTTACTTGGGGCTATATCAAGGGCTAAGCCTGCTGTTGGTGACTATGCGTTTACTACTCTTAGGCCAAATTTGGGGAATCTACACTATGATGATCTCTCAATAACCGTGGCTGATATTCCTGGGCTTATAAAAGGTGCACACCAAAATCGTGGACTCGGGCATGCATTTCTGCGCCACATAGAGCGCACAAAGGTTCTTGCTTATGTGGTAGACTTGGCTGCTGCTTTAAATGGAAGGAAGGGAATTCCGCCATGGGAACAGCTCAGAGACTTAGTTCTAGAGCTAGAGTACCATCAGGATGGTTTGTCCAATCGGCCATCCTTGATAGTTGCAAATAAGATTGATGAGAACGGTGCAGATGAAGTATATAAAGAGTTAAAGAGAAGGGTACAAGGTGTTCCCATCTTTCCTGTATGTTCTGTTTTGGGGGAAGGCGTGGCTGATCTTAAAGCTGGCCTGAAAATGCTTGTTAATGCTGAAACGTCGAATAAACTTTGCCTAGATCAAATTTTGCTTGCTTAG 1488 0.4328 MMLHFQAKCIKHMEDFTQRCITRWSITLYARYSNISLKKSKLAPLQERRMIDQCKIFAKAGDGGNGCFSLRKGRPDGGNGGTGGDVILECSPRVWDFSGLQRHLIAEKGGHGSSKKLIGSRGADKVARVPIGTVLHLVNGDIPSVVKTQSSTDVDPWDIPGALVDDLHDPGYGSTSNVTRVEVNATHSTGFSSTQAEEANAEKSEKSRQVTSTDAFSQLSTTNGAPEFCTEDIEENQEIIYNVAELTEEGQQIVIARGGEGGLGNAYCSKDSMKNVPNLQDPNGIHSSLHAGSPGFETVLILELKSIADVSFVGMPNAGKSTLLGAISRAKPAVGDYAFTTLRPNLGNLHYDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRDLVLELEYHQDGLSNRPSLIVANKIDENGADEVYKELKRRVQGVPIFPVCSVLGEGVADLKAGLKMLVNAETSNKLCLDQILLA* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0039 495 CDD Obg 308 479 IPR031167 GO:0005525
Pvu2g0039 495 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Pvu2g0039 495 PRINTS GTP1/OBG GTP-binding protein family signature 331 349 IPR006073 GO:0005525
Pvu2g0039 495 PRINTS GTP1/OBG GTP-binding protein family signature 358 373 IPR006073 GO:0005525
Pvu2g0039 495 PRINTS GTP1/OBG GTP-binding protein family signature 375 393 IPR006073 GO:0005525
Pvu2g0039 495 Gene3D GTP1/OBG domain 50 306 IPR036726 -
Pvu2g0039 495 PIRSF GTP-binding_obg 47 491 IPR014100 GO:0000287|GO:0003924|GO:0005525
Pvu2g0039 495 ProSiteProfiles Obg domain profile. 48 307 IPR006169 -
Pvu2g0039 495 Gene3D - 307 488 IPR027417 -
Pvu2g0039 495 Pfam GTP1/OBG 236 305 IPR006169 -
Pvu2g0039 495 Pfam GTP1/OBG 51 136 IPR006169 -
Pvu2g0039 495 PANTHER BNAA08G29050D PROTEIN 31 492 - -
Pvu2g0039 495 MobiDBLite consensus disorder prediction 187 225 - -
Pvu2g0039 495 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 31 492 IPR045086 GO:0003924|GO:0005525
Pvu2g0039 495 Pfam 50S ribosome-binding GTPase 310 435 IPR006073 GO:0005525
Pvu2g0039 495 MobiDBLite consensus disorder prediction 210 225 - -
Pvu2g0039 495 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 308 480 IPR031167 GO:0005525
Pvu2g0039 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 477 IPR027417 -
Pvu2g0039 495 SUPERFAMILY Obg GTP-binding protein N-terminal domain 50 305 IPR036726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0039 Pvu-Chr2 538659 541422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0039 - - gmx:100808337 804.283