Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0028 ATGTGGCATAATCTGATTCATGTGTATCTTTCGCAGATATTAGCTGCACATCGATATGGTATTAAGAGAGTCATTCTGCCTGAAAGGAACCTGAAGGACTTGGTTGAAGTACCCTCATCAGTACTGGCTAATTTGGAGATATTGCCTGCAAAACGTATGGAAGAGGTGCTAGAGCATGCTTTGGACGGTGGGTGCCCTTGGAGACAAGGCTCAAAGTTGTAA 222 0.4414 MWHNLIHVYLSQILAAHRYGIKRVILPERNLKDLVEVPSSVLANLEILPAKRMEEVLEHALDGGCPWRQGSKL* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0028 73 SUPERFAMILY Ribosomal protein S5 domain 2-like 10 60 IPR020568 -
Pvu2g0028 73 Gene3D - 6 65 IPR014721 -
Pvu2g0028 73 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 12 73 - -
Pvu2g0028 73 Pfam Lon protease (S16) C-terminal proteolytic domain 12 61 IPR008269 GO:0004176|GO:0004252|GO:0006508
Pvu2g0028 73 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 12 73 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0028 Pvu-Chr2 284204 285028 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0028 K01338 - pvu:PHAVU_002G002800g 151.754