Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0012 ATGGCTTCTCAAGTTCTTCTTCAGCAGGCCCTGTTTGCGCCCAAGCTCACTTTTCCTCCTTCTTCCTCTTCTTCTTCCCCTCGTAACTTTGCGCTAATTTCTAGGGTTCCTTCCACTCCAATTTCATGGCGCTGCACTCCCCTTATTGCCAAGTCTAGTTTCCTCGTGAGAGCTGATTCCAACCTCGAAGGCGGTGGTGAAGCCACCGAAGATGTTCCTTCCGATAATGTCGATGATGTTTCGGAAGGTGAAGCAGAACTGCTTTCGGATTCTGAAGCTCCGAAATTGCCCCGAAAAGCCAGAGTCAAGCTTGGAGACGTTATGGGGATATTGAATCAGAGGGCAGTTGAGGCAGCGGAGAAGGCAAGACCCACGCCAGACATTAGGACTGGGGATATTGTCGAAATCAAATTGGAGGTTCCTGAGAACAAGCGTAGGCTGTCCATTTATAAAGGGATTGTTATCTCGAAACAAAACGCTGGTATTCACACAACTATTCGAATCCGAAGAATCATTGCCGGCACTGGGGTTGAGATAGTCTTCCCAATTTACTCACCAAACATAAAAGAAATCAAAGTGGTAAACCACCGGAAGGTCAGAAGGGCAAGATTGTACTATCTCAGAGACAAGCTTCCAAGATTCTCCACTTTCAAATGA 657 0.4688 MASQVLLQQALFAPKLTFPPSSSSSSPRNFALISRVPSTPISWRCTPLIAKSSFLVRADSNLEGGGEATEDVPSDNVDDVSEGEAELLSDSEAPKLPRKARVKLGDVMGILNQRAVEAAEKARPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPIYSPNIKEIKVVNHRKVRRARLYYLRDKLPRFSTFK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0012 218 PRINTS Ribosomal protein L19 signature 112 141 IPR001857 GO:0003735|GO:0005840|GO:0006412
Pvu2g0012 218 PRINTS Ribosomal protein L19 signature 171 194 IPR001857 GO:0003735|GO:0005840|GO:0006412
Pvu2g0012 218 Pfam Ribosomal protein L19 116 211 IPR001857 GO:0003735|GO:0005840|GO:0006412
Pvu2g0012 218 PANTHER RIBOSOMAL PROTEIN L19 19 218 IPR001857 GO:0003735|GO:0005840|GO:0006412
Pvu2g0012 218 SUPERFAMILY Translation proteins SH3-like domain 115 218 IPR008991 -
Pvu2g0012 218 MobiDBLite consensus disorder prediction 64 92 - -
Pvu2g0012 218 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 19 218 - -
Pvu2g0012 218 Gene3D - 85 217 IPR038657 -
Pvu2g0012 218 TIGRFAM rplS_bact: ribosomal protein bL19 116 210 IPR001857 GO:0003735|GO:0005840|GO:0006412
Pvu2g0012 218 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0012 Pvu-Chr2 85863 88131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0012 K02884 - gmx:100500328 362.844