Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g0006 ATGATGCAGATCAGCTCCACCGTACCAGCCCACAACCTTCACAAGTTCCAGGCCATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAAGCCTCCTCATCCTCAACCTTTCAGAAGCCCTTTGTCACCACCGAGTCAACTCGCTTGCACCTCGCCAACCTCGACAAGCTCCTCGAGACCCAGATGCCCGTCGCCCCACCCACCCAAATCCACCACCACCAACAACACCCGCACCAACCAATCATCAACCACCCGAAGGAAAAGAAAGGAAGAAGCTTTCTAGAAGGGCTCAACTTGGCCAGGCTCTGGCCGGAGATGAAGGCGAACGAAGAAATGTCCCCGCGCCACCTCAATCGCCTCCAGCGGCTGCTCTCCATGACGGCGGAGTACTCCCCGAGGAACATCCTCGGCGGGCGGTGGAGAGAGTACCACGGCAGCAACGACTGGAAAGGGATGCTGGATCCTCTGGACGAAAATCTCCGGCGAGAAGTCGTGCGCTACGGCGAATTCGTCCAAGCCGCGTATCAGGCCTTTCACTCGGACCCAGCCATGTCAACCGAAGAGCCGCCACATCCTCGCCACGTGGCGCTTCCGGATAGGTCGTACAGAGTGACGAAAAGCCTCTATGCCACGTCATCGATCGGGTTGCCCAAATGGGTGGATGACGTGGCCCCGGATCTTGGGTGGATGAGCCAGCGGTCGAGCTGGGTTGGATACGTGGCCGTTTGCGAAGACAGAAGAGAGATCGCACGGATGGGAAGGAGAGACATCGTTATCTCTCTCCGCGGAACCTCCACGTGTATGGAATGGGCCGAGAATCTCCGGGCCCAATTGGTAGACCTTCCCGGAGGGCAAGGAAAGCCCAAAGTGGAGTGTGGGTTCATGAGTCTCTACAAGACCAAAGGAGCACACGTGGCGAGTCTGTCCGAGTCCGTTGTGGAGGAAGTGAAGAGACTCGTGAATCTCTACAGAGACGAAGAGTTGAGCATTACCGTCACCGGACACAGCCTGGGTGCCACGCTGGCCTTACTGGTGGCCGATGAGATAAGCACGTGCTGCGCCGGAGTTCCACCCGTGGCTGTTTTTTCCTTCGGTGGGCCGCGCGTGGGAAACAAGGCCTTCGGAGAGCGGTTGACGGCGAAGAACGTGAAGGTTCTACGGATTGTGAACTCGCAGGACGTGATTACACGCGTGCCTGGGATCTTCGTGAGCGAGGAGCTTGAGCAGAAAATACGGAACGTGGGAGGGGGTGTGTTGGAGGAGAAGACACCGCTGGCATACTCGCACGTGGGAACTGAGCTGCGCGTGCACACGAAGATGTCGCCGTACCTTAAACCGGATGCGGACATGGCGTGTTGTCACGACTTGGAGGCTTACTTGCATTTGGTGGATGGGTTCCTGGCTTCGAACTGTCCCTTCAGAGCCAATGCGAAGAGAAGCTTGGCGAGGTTAATGCAAGATCAAAGCTCCAATGTAAAGAAATTGTACACTAGCAGGGCTAAAGCCTTAACTGTTAATCTCTCTAGACAGGGATCCATCTCCATGTCTAATTGTTTACCAAGTCCTTCTTAA 1569 0.5628 MMQISSTVPAHNLHKFQAIRCPSFSFRCQASSSSTFQKPFVTTESTRLHLANLDKLLETQMPVAPPTQIHHHQQHPHQPIINHPKEKKGRSFLEGLNLARLWPEMKANEEMSPRHLNRLQRLLSMTAEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHPRHVALPDRSYRVTKSLYATSSIGLPKWVDDVAPDLGWMSQRSSWVGYVAVCEDRREIARMGRRDIVISLRGTSTCMEWAENLRAQLVDLPGGQGKPKVECGFMSLYKTKGAHVASLSESVVEEVKRLVNLYRDEELSITVTGHSLGATLALLVADEISTCCAGVPPVAVFSFGGPRVGNKAFGERLTAKNVKVLRIVNSQDVITRVPGIFVSEELEQKIRNVGGGVLEEKTPLAYSHVGTELRVHTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLARLMQDQSSNVKKLYTSRAKALTVNLSRQGSISMSNCLPSPS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g0006 522 PANTHER GLYCEROLIPASE A1 2 507 - -
Pvu2g0006 522 Pfam Lipase (class 3) 257 400 IPR002921 GO:0006629
Pvu2g0006 522 CDD Lipase_3 159 463 - -
Pvu2g0006 522 Gene3D alpha/beta hydrolase 138 511 IPR029058 -
Pvu2g0006 522 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 507 - -
Pvu2g0006 522 SUPERFAMILY alpha/beta-Hydrolases 160 465 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g0006 Pvu-Chr2 57852 59557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g0006 26 522 Acyl Lipid Metabolism Gene Families AT4G16820 57.692 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu2g0006 - - gmx:100806573 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0006 2 57852 59557 Pvu7g0486 7 3844730 3849360 PCT