Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2779 ATGCAGACTATGTGGCTGAGGCTTTCCAATTCCGACACCAAATCTCTTATCAGACTCTCATCCTATTTATATTCTTCTTATTTTCCGACACCATTGAGTTTTATCTCACTATCGTCGCCGTGTCGTGCTTCCTCCACCGCAACCAACTTGTTCGCATCTCCGTGGTCTTCTTCTCAACACCGGGGAATCAAAGTATCTGGTTCTGATGTTCTTAAAGTAGATCACTCTCATGAAGGAAGGGGAAAAGCCACAATCAAGGTGGAGCTTCGTGACATTGGCCAGGGAAACAAGGTAACACAAAGAATGGGTACCAATGACGATATTGAAAGGGTCTACGTTCAGGTAAAGACTTTCATGTTTATGTGCATGGATCGTGATGGAACTGTAGTTTTAATGGATCCTGACACATTGGATCAAATGGAAGTTTCCAAGGATTTGTTCAACAAGGATTGTTTATATCTACGAGATGAAATGAAAGTTAAGGTACAATTTTATGATGACAAACCTTTATCTGCTTCAGTTCCCAAACGTGTATCATGCATTGTCAAGGAAGTCATTGCAGCCACTCCAAGGAATAAAAAGGTAGTACTGGACAACGGCCTTACAATTGAAGTACCGCCTCACATTGTACCTGGTGATGCCATAGTTGTTAATACAGAGGATGACTCCTACATAGAAAGGGCCAAGTCATAG 693 0.4185 MQTMWLRLSNSDTKSLIRLSSYLYSSYFPTPLSFISLSSPCRASSTATNLFASPWSSSQHRGIKVSGSDVLKVDHSHEGRGKATIKVELRDIGQGNKVTQRMGTNDDIERVYVQVKTFMFMCMDRDGTVVLMDPDTLDQMEVSKDLFNKDCLYLRDEMKVKVQFYDDKPLSASVPKRVSCIVKEVIAATPRNKKVVLDNGLTIEVPPHIVPGDAIVVNTEDDSYIERAKS* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2779 230 Gene3D - 112 175 IPR012340 -
Pvu1g2779 230 SUPERFAMILY Nucleic acid-binding proteins 188 228 IPR012340 -
Pvu1g2779 230 Gene3D - 68 110 IPR014722 -
Pvu1g2779 230 PANTHER ELONGATION FACTOR P 26 228 IPR020599 -
Pvu1g2779 230 SMART Elong_fact_P_C_2 178 227 IPR015365 GO:0005737|GO:0043043
Pvu1g2779 230 SUPERFAMILY Nucleic acid-binding proteins 122 175 IPR012340 -
Pvu1g2779 230 Gene3D - 181 230 IPR012340 -
Pvu1g2779 230 SMART EFP_2 115 170 IPR001059 GO:0003746|GO:0006414
Pvu1g2779 230 Pfam Elongation factor P, C-terminal 188 227 IPR015365 GO:0005737|GO:0043043
Pvu1g2779 230 PANTHER ELONGATION FACTOR P (EF-P) FAMILY PROTEIN 26 228 - -
Pvu1g2779 230 SUPERFAMILY Translation proteins SH3-like domain 70 111 IPR008991 -
Pvu1g2779 230 Pfam Elongation factor P (EF-P) OB domain 126 170 IPR001059 GO:0003746|GO:0006414
Pvu1g2779 230 ProSitePatterns Elongation factor P signature. 193 212 IPR013852 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2779 - - gmx:100805422 341.273