Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2778 ATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAAATATCATGGTTCCAGTTTCTTCCTCATGAACCGGACCTGAACCCTCTACCTGACAAAAGTGTAAAAGTGGACCAAAAGGATGTCGCAAATTTACTGGTGCTTTCATCACATCTGCAACTGCAGAAGGAGGGATTTCTCGGCACATGGACAAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGCTTGCATAATCCAGATGAAAAGATTAAGCTGTGGCTTTTTCTTCCGGGGCGTCATTCATCAGTTGTTGAGTCTGCTCAGCCAGCAGTATCCAGATTAAGAGTTGTTGCTTCTGGGCTTTGGTTGGCTCCTGGCGATTCAGAAGAGGTTGCCGCTGCTCTCTCTCAGGCTTTGAGGAATCGTATAGAAAGGGCTTTGCTTGGGTTATATTACATGAGATTTGGAGATGTATTTTCGAAGTTTCATCAATTTCAAAGCGAAGAACTGTTCAGAAGAGGACAACCTGCAGTTGAATTTGCCTTTGCTGCAACTGAGGAAGCCATCTTCATACATGTCATAGTGTCCTCAAAGCATATCCGGATGCTTACCACGAGTGATCTGGAAAAAGTATTAAAACATTCGACAGAGTCTGCATGTAGACTTCCAGTGATTGTTTCTCCTCATGGAATTCGTGGCAGCTTGACTGGTTGTTCTCCAAGTGATCTTGTCAAGCAAAGCTATTTCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTACCATATAATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAAAATTGTTATGTTGAAGTAAGTCTGGGCTTCCCTAGATCTGGAACTGACAACTCGTTGCAGCCAAACAGAACTAGTGCCAGGAATTTACCCACACTTCATGTTGCTGAATCTCCTATTACAGGACGAAGTGATCACAAGGGATCAGCAGATCACTTGTCAGATTATGAGAAAACATTTTTGTATCCAGCTGAGGCAGTGCTCGTGCCAGTTTTACAAACATCATTAGCTAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCTCTTCCCGGTTCCTCTTCCTTAATTCACTGTGCTGGTAATGTTGATTGTTGTGAGGATCCTTGGACTGAAATCAACGGAGCCCGTACGCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGTTCTAGTGATAGTGATTACAAGACTACGGGACCAAGTGAACTGGAGGCAGATGCTGATTCTTTAACGTGTAGACAGTCTATGGTGTCTTCTGCTGATCAACTGGAAAGTGATGGCCCCAAATTGGGCTCTAAGAGGTCTCGAACAGGGGTGACAGAGTCATTAAGTACAGCTGCAAACATTCCCGTGCAGGATACTTATATGTCTGATTTTGGTTCCGTGGAAGTGAACAATTCAGCCATTACAGGAGTGGGAAATGAGCCAATTGGGTCTTACTGGGACTGGGATGATGATGATAGGGGCATGGAAATGGATATTCAAGCCCTTCTATCAGAATTTGGTGATTTTGGTGACTTCTTTGAAAACGACGTCTTGCCCTTTGGAGAGCCCCCAGGAACAGCAGAATCTCAGGCACTTATGTTTTCTTCCCCGGATTATGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGATGTTCCAGATCAAATACTTTTGCCTGTTGGGTTTCCTTCCTTTGAGAGCTTTAATCCCCCTCCTTCAACATCTGTGGAGGAATGTCTTAACAAAAGTCAAGATAACTTAAATAACTCTATGTCTTTGGGTCCAACCAATCAAACTCAAATGTTGTATACCAGGGAGTTTGATCATATAATGAAAGCTGAAGCAATGATGACATTTGCTCCTGAATTTGGTGCTGTTGAGACCCCTACCTATGAGCTGTCCACGACCTTATTCAGAAGCCCATATTTTCCAAAATGTCGTAAAGCAGAGAGTTCCAATTCAAGCTCAAACAATTACTTATATGGTGCAGCACCACCCTCTTCTCCTTGCACCGAAGGATCGGAGGGGAAGAATGGAATGTCTTTCAATACAAAAACAGGTTCTGGAAAACATGATTCTGGGACAAGTCTCCACTCAAAACATTACTATACATTTGTGGAAAGTAGGAAAGAAAAAAATGATAAAAATCCTGTTGTATGTAATGATAATAGCATTGCTAAATCTGACGGGATACTGTCACTTTCAAACATTGGTTCTAATGCTATTGTCAAGTCTTCCCTTAGGAAGACAGCTGAAGGCACACATGAACCAGAGCATGCTCTTCTATCTGCAAAAACTTTGTTGGCAACTGATATCACATGTGTTATGTTGCAAGCTTCCGTGTGCAGATTACGTCATGTTCTCTTATCTTCAGGTAACCTAATGCCTGTTGGTTTCAGTAGGTCAACTGGGGTTTCATTTTTTAATCAGCTTCCTAGTGAACCAAGTACAACAACAGACAACATATCTGGGAAGTATGACGTGAAGAAGAAAGAAAATATACCAATTCGTATTGCAGGTGATATTGATGGAGGAATGCTTGATGGTCATCTGAATGCCCCTGTTGGTGTTTGGCGCACATTAGGAGCTTCAAAAGTTGTAAAACCTTCAAATTCACCTAACATGGAAGTTGGTCCTTCTTTTTCACATAATTCTTTCAATGAAGAAGGTATTCTTTCTTATGGTCAAAGGAAACCGCTTCAGGAGCTCCTTGATGGGATTGCTTTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGCAGATTGTGGTGATGGTCCTTATGGTTTACTTGCAATGCAAGAACAATGGAGGCGTGGATTCTGTTGTGGCCCTTCCATGGTTCATGCTGGCTGTGGGGGGACCCTTGCCTCTTCTCATTCGCTAGACATTGCTGGCTTGGACTTAGTAGATCCACTTTCTGCTGATGTTCATGCATCCACTGTCATCAGTTTGCTGCAGTCTGACATAAAAACAGCTTTGAAATCTGCCTTTTCCAATTTGGAAGGGCCATTATCTATAACTGATTGGTGCAAAGGATGCAATCCATTGGTTGATACTGGAAGCATAGTTGAGGGAGTCTCTGTTGAATCAACCAATAATGAATGTAGAGATTCTTCAGAACCAATGAGTCCATCCCAATCATCTGTTGGTGGATCTTCTAGCATAAAGGTTTCCAACATCATGGATGGTGCTAAGGGGGATGAGACTTCTCAAAGGAGGTCTGGCCACGATTTATGTAATACAGAGTCAGAGCAGCAAACATGTGCCCGGCTTAAACCTACGCTCATTGCTCTTCCATTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTGAAGACATCAGCAAACTCCTTGCAGCATTGGGAAAAAGCTCCTCTAGAGCCCTATGCTCTACAGAAACCTATTACGTATCATGTTGTATGCCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAGACATGCAAGCTAGGTACTCATTCACCTCAAGGCTTGGGGAATCAGATGGAGATAGAGTCTTCGAAGTTGTCATCTTGTGGTTTTGTTTTACTTGACTGCCCCCAATCAATGAAGATTGAGAGCAGTAATGCATCTCTTGTTGGTTCAGTGAGTGATTATTTTTTATCATTATCAAATGGTTGGGACATGACTAGTTATCTCAAGTCTCTTTCTAAGGCACTTAGAGGTTTGAAAATTGGCTCTTGCTTTTCTACAAACCCCAGCGAAGGAAGTAACAGTTCGTGCTTGGTAATCTATGTGGTGTGCCCATTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCTGTTGCGATTGGATCAGTAGTCCAACAGTTGGATAGAGAGAGGAAATCTAGCTTGCATAGCCAGGTTGTGAAGGCTTTAAGCGGCTTAGCTACTGTTGACGAGGCTTCTCCATCTAATATCCTTGTGCTTTCTGGGTTTAGTATTCCAAAATTGGTCTTGCAGATTGTTACTGTGGATGCCATTTTCAGAGTCACTAGCCCATCTGTCAGCGAACTTGTCATTTTAAAAGAGACTGCTTTTACTGTTTACTGCAAGGCTCGTCGAATTTCGCGTGGAATCTCTAGTGATTTTGCTCAGTCTGCATTTTCTGGAAGATCTCATTCTGTTTTGACGCAACTGCCTTCTCCCATCTCTGGCATGTGGAAAGACTGTGTTGGTCCTCGAATGGCAGGACACTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGCCTGGTACTTGGGATAATTCTTGGCAGCCAACAAGGACTGGGGGGTTAAACTGTGATCCAAGTAGAACTGGGGATATTTTTCTCCATGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTGGCAGAACCAGGTTCACTTGACAATGGTATTTCAGTTATTGGTAGCCCCACTTCAGAATCTTCCAAGGCATTGGTAGATGACAGTAGTGGTAACTATGTACAGAGTACAAGTACAACAGGAAGTGTAGAGTCTGCTTCAAGCGCTGATGGATCTGGGTCTGATCTGAAGACTCCTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAGGGGAGAATTGCTGGACTGTAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGACACAAAGGGTCTGCAGTGCCTATTTGTTCAAATTCTTCAGCAAGGCTGTCTGATTATTCAATCTTGTGACCCTGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTTTATGAGCTTGAGTATCTTGAGTGGCAGAAAGCCATTTATTCCGTCGGTGTATCTGAGATGAAGAGATGGCCTCTGCAATTGCGGAAATCTATGTCTGACGGGTTGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAACCAGACATGAGTTTGATCCCAGAACGAACTCTTCCTTCTTCACCTAGTCCCTTGTACAGCCCCCATACCAAATCCACTGGTTTTATGAAAGGTAATTTAGGGCAACCTGCTGCAAGAAAGCAGCTTATGGGTGGACATTCTATGGTTGACAATTCAAGGTGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACGTTACAACTAGTTCTCCCAGCAGATTCCTCCACTCCTAGTTACATCGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACGTCTTCTGCATACATTCTAATTCCTTCTCCCAGCATGCGATTTCTTCCTCCAACAGTTCTTCAACTCCCCACGTGCCTCACAGCAGAGTCACCACCATTGGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCTCTCTCTACTGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGACTACAGAAGCAACCTAAAAGAAGAATGGCCCTCTATACTTTCAGTGAGCCTCATTGATTATTATGGAGGTACTAACATCCCCCAAGAGAAAGTTGTCCGAGGAATTAACAAGCAAGTTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTATTGCAGCAGAGCTTCATGCCTTGTCTTGGATGACAGTGAGCCCCACATACTTAGAGCGGCGAACAGCGCTTCCCTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCCGATAAAGAGCTCAGCAAGCATTCAGATAAGTCTTGA 5859 0.4339 MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDQKDVANLLVLSSHLQLQKEGFLGTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVESAQPAVSRLRVVASGLWLAPGDSEEVAAALSQALRNRIERALLGLYYMRFGDVFSKFHQFQSEELFRRGQPAVEFAFAATEEAIFIHVIVSSKHIRMLTTSDLEKVLKHSTESACRLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPYNVSQGVGCQLRGQNCYVEVSLGFPRSGTDNSLQPNRTSARNLPTLHVAESPITGRSDHKGSADHLSDYEKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPGSSSLIHCAGNVDCCEDPWTEINGARTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSADQLESDGPKLGSKRSRTGVTESLSTAANIPVQDTYMSDFGSVEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMFSSPDYGDVNSSPGGVIDVPDQILLPVGFPSFESFNPPPSTSVEECLNKSQDNLNNSMSLGPTNQTQMLYTREFDHIMKAEAMMTFAPEFGAVETPTYELSTTLFRSPYFPKCRKAESSNSSSNNYLYGAAPPSSPCTEGSEGKNGMSFNTKTGSGKHDSGTSLHSKHYYTFVESRKEKNDKNPVVCNDNSIAKSDGILSLSNIGSNAIVKSSLRKTAEGTHEPEHALLSAKTLLATDITCVMLQASVCRLRHVLLSSGNLMPVGFSRSTGVSFFNQLPSEPSTTTDNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVGPSFSHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLDLVDPLSADVHASTVISLLQSDIKTALKSAFSNLEGPLSITDWCKGCNPLVDTGSIVEGVSVESTNNECRDSSEPMSPSQSSVGGSSSIKVSNIMDGAKGDETSQRRSGHDLCNTESEQQTCARLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMEIESSKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDMTSYLKSLSKALRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQLDRERKSSLHSQVVKALSGLATVDEASPSNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYCKARRISRGISSDFAQSAFSGRSHSVLTQLPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLNCDPSRTGDIFLHDEIRYMFEPLFILAEPGSLDNGISVIGSPTSESSKALVDDSSGNYVQSTSTTGSVESASSADGSGSDLKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLIIQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGLSATSNGSSLQQPDMSLIPERTLPSSPSPLYSPHTKSTGFMKGNLGQPAARKQLMGGHSMVDNSRCLLHWAQSISFVAVSMDHTLQLVLPADSSTPSYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSILSVSLIDYYGGTNIPQEKVVRGINKQVGRSLSWEAKDFEIETHLVLESIAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADKELSKHSDKS* 1953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 671 714 - -
Pvu1g2778 1952 Pfam MID domain of medPIWI 1270 1393 IPR041285 -
Pvu1g2778 1952 Pfam MID domain of medPIWI 1157 1272 IPR041285 -
Pvu1g2778 1952 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1945 - -
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 391 469 - -
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 690 714 - -
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 1513 1549 - -
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 1054 1078 - -
Pvu1g2778 1952 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1945 - -
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 391 422 - -
Pvu1g2778 1952 MobiDBLite consensus disorder prediction 1513 1546 - -
Pvu1g2778 1952 Pfam Mediator complex subunit 13 N-terminal 2 340 IPR021643 -
Pvu1g2778 1952 Pfam Mediator complex subunit 13 C-terminal domain 1544 1931 IPR009401 GO:0003712|GO:0006357|GO:0016592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2778 K15164 - gmx:100782017 3532.27