Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2768 ATGAGATCAGATTCCCTTCAACAACAAAACAAACTCTTAATTGGAATGGTTTCCAGAGGCAAAAGGGTGAGGGATGTAGCATTCTCCTCCTTCATCTTGCTTTTACTGTTGGTTGGCTTTGCAAATTCAGATTTAGGCAAAGACAGAGAAGAATGTGCAGACAAACTTGTGGGGCTGGCTAGCTGTGTTCCTTACGTTGGGGGTGAAGCCAAAACCCCAACCATAGATTGCTGCAGTGGCCTCAAAGTGGTTCTCGACAAGAGCAAGAAATGCATCTGCATCCTCATCAAAGATCGTGATGACCCCAATCTTGGCATCAAAATCAATGCCACTCTTGCTATTCAACTACCCTCTGCTTGCCACGCACCTGCTAATATATCTCACTGTGTAGATCTTTTACATTTAGCACCTAACTCTCCTGATGCTAAGGTGTTTGAGGGATTCCAAAATTCCGCTAAAACAAACAGTTCCACCCCAGTTTCCAGTGCTGCAGGTGGTGCTGAGAAAGGATCAAACTCAAGCGGTCAGGAAAAGAGTGGTGTGTCTACAAAGAGGTGGTCGTTGCGACACCTGCTTTCCTCTATCTTACCACTTCTCTTCCTTGTTGTTTGA 612 0.451 MRSDSLQQQNKLLIGMVSRGKRVRDVAFSSFILLLLLVGFANSDLGKDREECADKLVGLASCVPYVGGEAKTPTIDCCSGLKVVLDKSKKCICILIKDRDDPNLGIKINATLAIQLPSACHAPANISHCVDLLHLAPNSPDAKVFEGFQNSAKTNSSTPVSSAAGGAEKGSNSSGQEKSGVSTKRWSLRHLLSSILPLLFLVV* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2768 203 MobiDBLite consensus disorder prediction 152 179 - -
Pvu1g2768 203 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 130 IPR036312 -
Pvu1g2768 203 SMART aai_6 52 129 IPR016140 -
Pvu1g2768 203 Pfam Probable lipid transfer 47 129 IPR016140 -
Pvu1g2768 203 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 27 195 - -
Pvu1g2768 203 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 27 195 IPR043325 -
Pvu1g2768 203 CDD AAI_LTSS 59 121 - -
Pvu1g2768 203 Gene3D - 49 129 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2768 Pvu-Chr1 52015410 52016576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2768 28 196 Acyl Lipid Metabolism Gene Families AT1G55260 47.399 4.87e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2768 - - pvu:PHAVU_001G268300g 372.474