Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2767 ATGAGTGCAGAGATTGATTCAACTTCCGCTCCTGAACCTCACAAAATGTCTGGAGCTTCATCTGCAACAACTACCAGTGGCCAAAAGCTCTCTATATTTGCTTCCAAATCAGGATTTGTCATCCCTAAAAACAAATTGTCGGGGTCACTGGTTCCTATTTTCCGAGGGGCTACAAAACACGGGGTCACTGGAGCCATTAACGAAGAAAGTTCAAAACAAACTGAGAGGAAATCGAAATGGGGACCTGATCTTACACAGGATGCAACTGTCAGGAGGGGAAAGGCTTTAGCTTTGCAGATTCGAGTGGATCAAATCACAAAGCAGTTGGAATCAGAAAAACTGGAAGTTGGGGACACTCAGAACTTGCCATTAGGAGCTGAGAATTCTGATCAAATCAAATATGGCTCTCAAATTAACAACAAGAAGTCAGGAATGCTCGAACTTGAAAAGCGGGAAGCCATAGGTGAAATACTAAAATTAGATCCCAGTTACAAACCTCCACGTGGTTTTAAACCATTATTAAAAGAAGCCAGCATTCCTTTGCCTGTACAAGAATATCCTGGGTGCAATTTTGTTGGTCTAATATATGGGCCTGAAGGTGACAATCAGAAACAACTAGAAAAGGAAACTGCTGCAAAGATAAAAATTCACGGAACCAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCTGGAACGGATATCCAGTGCAGTTACAAGGAGATGTATGTTAACATATCAGCTGATAGTTTTGAAAAAGTGGATGCAGCAATGTCAATAATTGAACTGCTAATTACCTCTGTAACTGGGAATTTAGCTGCTGGCTCTACAGCCTCTATATCAGTTTCTAGGGACAGCACTGATATTCTGTGTCAAAGCCAAGAAGGTCACCCTTCTCATGCAGATGCTGTTTCTCTGGAAAACCAGGCTGTTTTGCAACCAGTAGCTGTTACCCAAATGCATGAAGATAACTTCCAATACTCTACACCATGGTTTTCAGTTGTTCCATCTAATACCCCCATATTTGCTTCATCTGGCACTGTAGCCTCCCCAAATCCATTAGGTCTTGCTAGAACTCCCCATTTTCCACCACAAACTTCAAACTCGGTTCCTACTTTTGGTGCTCAACCTGGATTTCAACCAATTATTCCAAATCAACATATTTCTGTGCAAGCACCACCACCAAGACAGATTTTACCCTATCTACATTTGACTCAGGCAAGTCCTATGGGTTACGTTGGCCCCCCAAGAAATGCTTCTATAATGTCTGTACAGAATTTGTCAACTCCGACAAATGCTTCACATTCATTTCCTGTTACTTTAAGCCAACCAACGCCAATAGGACAACTGCAGAACACAGTGTCTTCATTGCATCTACCCATATCTGGTGTATCACCATTGCCCATACCTAACCAGTCCATCACCCATCTTGGGGTCCCTCCTGGCCAGAATGAAGCCCTTGTCGCTGTTAAAACATCTATTGGTCCCAGCAATATGGGGTCAATGGCTCCACCAGGAAGACCTGCCTCTCTACATCAACAACCGGATGTTGCATTTATGCCACCACAGTCAAATATGTCAATGATGCCACGATCTGCCTCCTTTCCTCGACATCAAGTAGGAATATCCCCCGCACCACTTTTGAGACCTATGTCTGTACCAATACCTGCACCTAAACATTCATCTGTAAACCATCTATCAGGACCAGTTTCATTTCCTTCGTCTGGAATATCCTCTTCTTTTCCTTTGCCTCAGCAAACAGGAATACCTAATTCTGCTTCTGGAATTGCTCCTTTTCACACCCATGTAAAACCATCTGTCTTGGCGCCATCAAAATCTGGAAATTTTACTTTTCAATCACATCCCCCCAATGCAGACTACAGTCAAGTGGTTTCTGGACCAAACAGTCAAGGAGGTGCTACACAAGAGCCACCTCCTGGTCTACGGCCCCCGCCGTTTGGGTTTGGCGTACCTGATCAGCCTCTTCAAATATTTCCTAGGACACAATTCCCTGCTCAAGTGGATCAAACCATTTCCTTCGGGGGAAGATCAGGTTCCATCTCGAACTCAATTCCACCACCCAGACACACTGCATTTCCATATGGTGGTCAACCTGCACCTAGATCTCCTGTCCCACAAATGGGTATGAAGAACTTCCTTCCTGCTCCGCAAAGGCCAAACTTGACTGGTGATGTTGCCCAAAGAGGCATGCCTATCCGACAAAGCTATGCTGTTCAGATGGCACGGCCAGATATTTCAATGCCCCTGAATCACAAGTTTGCCAACAATACCCTCATGGCTTCTGGTAAGCTACCATATTCTGCGGACCAAATTTATGACCCCTTTTCACCCACTTCTGCACCTCCACAACAGAAAGGTAATCCTGGACACTGA 2394 0.4436 MSAEIDSTSAPEPHKMSGASSATTTSGQKLSIFASKSGFVIPKNKLSGSLVPIFRGATKHGVTGAINEESSKQTERKSKWGPDLTQDATVRRGKALALQIRVDQITKQLESEKLEVGDTQNLPLGAENSDQIKYGSQINNKKSGMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGCNFVGLIYGPEGDNQKQLEKETAAKIKIHGTKADTGEKGEIKPGTDIQCSYKEMYVNISADSFEKVDAAMSIIELLITSVTGNLAAGSTASISVSRDSTDILCQSQEGHPSHADAVSLENQAVLQPVAVTQMHEDNFQYSTPWFSVVPSNTPIFASSGTVASPNPLGLARTPHFPPQTSNSVPTFGAQPGFQPIIPNQHISVQAPPPRQILPYLHLTQASPMGYVGPPRNASIMSVQNLSTPTNASHSFPVTLSQPTPIGQLQNTVSSLHLPISGVSPLPIPNQSITHLGVPPGQNEALVAVKTSIGPSNMGSMAPPGRPASLHQQPDVAFMPPQSNMSMMPRSASFPRHQVGISPAPLLRPMSVPIPAPKHSSVNHLSGPVSFPSSGISSSFPLPQQTGIPNSASGIAPFHTHVKPSVLAPSKSGNFTFQSHPPNADYSQVVSGPNSQGGATQEPPPGLRPPPFGFGVPDQPLQIFPRTQFPAQVDQTISFGGRSGSISNSIPPPRHTAFPYGGQPAPRSPVPQMGMKNFLPAPQRPNLTGDVAQRGMPIRQSYAVQMARPDISMPLNHKFANNTLMASGKLPYSADQIYDPFSPTSAPPQQKGNPGH* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2767 797 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 177 271 IPR036612 GO:0003723
Pvu1g2767 797 MobiDBLite consensus disorder prediction 776 797 - -
Pvu1g2767 797 MobiDBLite consensus disorder prediction 779 797 - -
Pvu1g2767 797 SMART kh_6 173 266 IPR004087 GO:0003676
Pvu1g2767 797 MobiDBLite consensus disorder prediction 614 655 - -
Pvu1g2767 797 ProSiteProfiles Type-1 KH domain profile. 190 261 - -
Pvu1g2767 797 Gene3D K Homology domain, type 1 170 294 IPR036612 GO:0003723
Pvu1g2767 797 MobiDBLite consensus disorder prediction 1 27 - -
Pvu1g2767 797 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 23 791 - -
Pvu1g2767 797 PANTHER RNA-BINDING PROTEIN RELATED 23 791 IPR045071 -
Pvu1g2767 797 MobiDBLite consensus disorder prediction 614 642 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2767 K13095 - gmx:100777227 1206.05