Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2765 ATGGGAATGGTGGTGGCAGTGACGGTTACAGTTACAGTTACAGTTACGGCAATGGTGATGGAGATGGTGGGAGGAGGGAGTTGGTGCGTGGCGAAGATTGGGGTGAGCGAGGAAGCATTGCAGAGAGCATTGGACTCTGCATGTGGAGGAGGAGACGGCGGTGCCGATTGCGCTCCCATTCAGCCCAACGGCCTCTGCTTCACTCCCAACACCCTTCAAGCTCACGCTTCCTACGCCTTCAACAGCTTTTACCAGCGAAACGCTAGAGCTTCTAACGCCTGCCTCTTCAATGGCGCTTCAACCGTCGCCCAAACAGATCCCAGCTATGGATCTTGCGTGTACCCGTCCTCCTCCGCAGTGGCAACTCCAACCGCCAGTACTGCTGAAGTTACAAATACAACAGCGCCAACACCTTCCTCGACAACGACTACTCCAATCCATGGCCGGGATGGTGCAGGAATGGACCCTCAAATCCCCCAAAATTCTACCCCTACTTCAAACACAATGACCTCTTTTTTACTCTTTCTTCTCATTCTCTTCCTAGGAGACACTTTTTTTGTAGCATTGTAA 570 0.5228 MGMVVAVTVTVTVTVTAMVMEMVGGGSWCVAKIGVSEEALQRALDSACGGGDGGADCAPIQPNGLCFTPNTLQAHASYAFNSFYQRNARASNACLFNGASTVAQTDPSYGSCVYPSSSAVATPTASTAEVTNTTAPTPSSTTTTPIHGRDGAGMDPQIPQNSTPTSNTMTSFLLFLLILFLGDTFFVAL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2765 189 Pfam X8 domain 28 100 IPR012946 -
Pvu1g2765 189 MobiDBLite consensus disorder prediction 125 163 - -
Pvu1g2765 189 MobiDBLite consensus disorder prediction 125 147 - -
Pvu1g2765 189 PANTHER BETA-1,3 GLUCANASE 12 153 IPR044788 -
Pvu1g2765 189 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 12 153 - -
Pvu1g2765 189 SMART X8_cls 27 114 IPR012946 -
Pvu1g2765 189 Gene3D - 21 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2765 Pvu-Chr1 52002991 52005129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2765 25 116 Glycoside Hydrolase AT4G26830 53.261 7.12e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2765 - - pvu:PHAVU_001G268000g 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2765 1 52002991 52005129 Pvu1g2765 1 52002991 52005129 ECH