Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2755 ATGGAGACAAGCAAAAGCATGAAGCTGGAGAGATACAACAGCTACATACGAAGAGTGAACAGCACAAAGCTGCTTAACGCCTCCTCCAAGCTCCTCTTCCGCGCCACCCTTCTCGTCGCACTCATCCTCGTTTTCCTCTTCACCTTCAACTACCCTCCCCTCGCCGACTCCACCCACCGCCATCTCCACGCCCACTCTCACTTTCTCTCCTCCGCATTCGGCGCCTGGGAGAAGCAGCTCCGCCACTCCTCCACCCCGCGCCGCCCCAACGGCCTCACCGTCCTCGTCACGGGGGCGGCTGGCTTCGTCGGCAGCCACTGCTCTCTCGCCCTCAAACGACGGGGAGACGGTGTGCTGGGTCTCGACAACTTCAACGCATACTACGACCCCTCCCTCAAGCGCGCTCGCCAAGCAATGCTGGCCAAGCACCAGGTCTTCATCGTCGAAGGGGATCTCAACGACACGCCCCTGCTCCAGAAGCTCTTCGACGTCGTCGCCTTCACCCACATCCTCCACCTCGCCGCCCAGGCCGGCGTGCGCTACGCGATGCAGAACCCCCAGTCCTACATCACCGCCAACATTGCCGGCTTCGTCAACCTTCTGGAAGTTTCCAAATCCGCCAACCCCCAACCCGCCATAGTGTGGGCTTCCTCCAGCTCCGTCTACGGCCTCAACACGCAGAACCCCTTCTCGGAGCTCCACCGCACCGACCAGCCCGCCAGCCTCTACGCCGCCACCAAGAAAGCGGGGGAGGAAATCGCACACACGTACAACCACATTTACGGGCTCTCACTCACCGGCCTCCGGTTCTTCACGGTGTACGGCCCCTGGGGGAGACCCGACATGGCTTACTTCTTCTTCACCAAAGACATCCTCCAGGGGAAGACCATCGACGTGTACCAGACGCAGGACGGGAAGCAGGTGGCGCGTGACTTCACCTACATCGACGACATCGTGAAGGGGTGTCTCGGGGCGCTGGACACCGCCGAGAAGAGCACCGGGAGCGGCGGGAAGAAGCGTGGGCCGGCCCAGTTGAGGATTTACAATCTGGGCAACACCTCGCCGGTGCCGGTGGGGAACCTGGTGTCCATTCTGGAAAACCTGCTGAACACGAAGGCGAAGAGGCACGTGATCAAGATGCCGTCGAACGGCGACGTTCCGTACACACACGCGAACGTGAGCCAGGCCTTCCGCGATTTCTCTTACAAGCCCACGACCGACCTCCCCAGCGGGCTCCGGAAGTTCGTGAAGTGGTACGTGGGCTATTACGGGCCCCAGCTGAGGCCCAAAAAGGAATCTCGTCTTGACAACTGA 1314 0.6126 METSKSMKLERYNSYIRRVNSTKLLNASSKLLFRATLLVALILVFLFTFNYPPLADSTHRHLHAHSHFLSSAFGAWEKQLRHSSTPRRPNGLTVLVTGAAGFVGSHCSLALKRRGDGVLGLDNFNAYYDPSLKRARQAMLAKHQVFIVEGDLNDTPLLQKLFDVVAFTHILHLAAQAGVRYAMQNPQSYITANIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNTQNPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYQTQDGKQVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGPAQLRIYNLGNTSPVPVGNLVSILENLLNTKAKRHVIKMPSNGDVPYTHANVSQAFRDFSYKPTTDLPSGLRKFVKWYVGYYGPQLRPKKESRLDN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2755 437 Gene3D - 95 406 - -
Pvu1g2755 437 Gene3D - 271 419 - -
Pvu1g2755 437 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 2 434 - -
Pvu1g2755 437 Pfam NAD dependent epimerase/dehydratase family 94 332 IPR001509 -
Pvu1g2755 437 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 423 IPR036291 -
Pvu1g2755 437 PANTHER EPIMERASE-RELATED 2 434 - -
Pvu1g2755 437 PRINTS Nucleotide sugar epimerase signature 120 136 - -
Pvu1g2755 437 PRINTS Nucleotide sugar epimerase signature 310 325 - -
Pvu1g2755 437 PRINTS Nucleotide sugar epimerase signature 345 360 - -
Pvu1g2755 437 PRINTS Nucleotide sugar epimerase signature 385 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2755 Pvu-Chr1 51951572 51953399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2755 2 433 Miscellaneous Gene Families AT3G23820 79.642 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2755 K08679 - gmx:100786653 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2755 1 51951572 51953399 Pvu1g2755 1 51951572 51953399 ECH