Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2754 ATGAACATCGTGGCGGCGGAGGAGAGTGGTTTCACGCGCCTTGCCTCATTCGTCTGCGATTGCGATCCTTTCACGGAGGAAGAGCTTGAAGGCATCGAAGCTTCTCTTTCCAACCCTAACATCAAACGACGTCGATTCAACCATCTCACTCCCCGTCGCCGCCGTTTGCCCGCATCGCTTATCGCTCTTCAACACCCGAATCTGTCTTCGTTACCCCGTCTTCCAGGCTATTCGAGAATGAGATTACCTGCAATCAAGTTTAATGGTCGAATTATGTACAGCAGGACTTTTGATTCTGTAGAGAAAGCTGCAGCAAAACTCTTACAAGCTCTGGGTGAAAAAAATAGAGAGATTGTGCAAATTGCAATTGGATTTGACATTGAGTGGAAACCCTCCTTCACAAAAGGTGTTCCACCCGGAAAGGTAGCAGTTATGCAGATATGTACTGACAGTAGTCATTGTCATGTTCTACATCTAATTCATTCTGGAATCCCTCGAAATTTACAGCTTTTGCTTGAAGATCCCACAGTTCTGAAGGTTGGAGTTGGGATTGATGGTGACGCTGTGAAAGTTTTTAGAGATTATAAAATATCTGTTAAAGGTGTGATGGATCTTTCTCTCCAGGCTAATCAGAAGCTTGGTGGTGATCACAAGTGGGGTCTTTCATCTTTGACTGAAAAACTTTTATCGAAACAGCTTAAAAAGCCCAATAAAATAAGACTGGGAAATTGGGAGAGTCATGTTTTGTCAAAGGAGCAACTAGAGTACGCAGCAACAGATGCTTTTGTTTCTTGGTATCTTTATCAGGCAATTAAAGATCTCCCGGACGCCCAAGAAGTCACGGACAAAAGTGCCGAGGTTGATGGTTTAGTGCAGGAATGA 882 0.4399 MNIVAAEESGFTRLASFVCDCDPFTEEELEGIEASLSNPNIKRRRFNHLTPRRRRLPASLIALQHPNLSSLPRLPGYSRMRLPAIKFNGRIMYSRTFDSVEKAAAKLLQALGEKNREIVQIAIGFDIEWKPSFTKGVPPGKVAVMQICTDSSHCHVLHLIHSGIPRNLQLLLEDPTVLKVGVGIDGDAVKVFRDYKISVKGVMDLSLQANQKLGGDHKWGLSSLTEKLLSKQLKKPNKIRLGNWESHVLSKEQLEYAATDAFVSWYLYQAIKDLPDAQEVTDKSAEVDGLVQE* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2754 293 CDD WRN_exo 100 272 - -
Pvu1g2754 293 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 74 279 - -
Pvu1g2754 293 PANTHER 3-5 EXONUCLEASE 74 279 - -
Pvu1g2754 293 Pfam 3'-5' exonuclease 103 272 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pvu1g2754 293 Gene3D - 76 279 IPR036397 GO:0003676
Pvu1g2754 293 SUPERFAMILY Ribonuclease H-like 84 279 IPR012337 -
Pvu1g2754 293 SMART 35exoneu6 91 276 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2754 Pvu-Chr1 51942259 51945747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu1g2754 K22807 - gmx:100801291 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2754 1 51942259 51945747 Pvu1g2754 1 51942259 51945747 ECH